RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TM7SF3Q9NS93 570 aa18.55■□□□□ 0.56
BRF1-215ENST00000549655 TMED5Q9Y3A6 229 aa18.55■□□□□ 0.56
BRF1-215ENST00000549655 C15orf38-AP3S2A0A0A6YYH1 394 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 H0YIV9 168 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 KLF8O95600 359 aaPredicted RBP18.54■□□□□ 0.56
BRF1-215ENST00000549655 DNTTP04053 509 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 IL6P05231 212 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 PRPS2P11908 318 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 AMD1P17707 334 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 TRIM23P36406 574 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 CSTF3Q12996 717 aaKnown RBP18.54■□□□□ 0.56
BRF1-215ENST00000549655 SGCGQ13326 291 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 TSTA3Q13630 321 aaPredicted RBP18.54■□□□□ 0.56
BRF1-215ENST00000549655 SPANXN4Q5MJ08 99 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 UNC5DQ6UXZ4 953 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 ARPINQ7Z6K5 226 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 PDZD3Q86UT5 571 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 TP53I13Q8NBR0 393 aaPredicted RBP18.54■□□□□ 0.56
BRF1-215ENST00000549655 MTERF1Q99551 399 aaKnown RBP18.54■□□□□ 0.56
BRF1-215ENST00000549655 ALG2Q9H553 416 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 SGK2Q9HBY8 427 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 ITM2CQ9NQX7 267 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 GPRC5BQ9NZH0 403 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 EGFL7Q9UHF1 273 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 ASF1AQ9Y294 204 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 MTCH2Q9Y6C9 303 aa18.54■□□□□ 0.56
BRF1-215ENST00000549655 PLRG1O43660 514 aaKnown RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 PGRP06401 933 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 HOXB2P14652 356 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 ATP6V1B2P21281 511 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 MAPK1P28482 360 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 GSK3BP49841 420 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 CLDN8P56748 225 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PLIN5Q00G26 463 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 LIPEQ05469 1076 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PWP1Q13610 501 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 DDX39BQ13838 428 aaKnown RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 ADGRE1Q14246 886 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 SLCO4C1Q6ZQN7 724 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PRR23BQ6ZRT6 265 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 IFNEQ86WN2 208 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 LILRA2Q8N149 483 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 LMNTD1Q8N9Z9 388 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 ZUFSPQ96AP4 578 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 APOLD1Q96LR9 279 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PPM1MQ96MI6 270 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 C1QTNF2Q9BXJ5 285 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 OSBPL6Q9BZF3 934 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 RIMS3Q9UJD0 308 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 AP4S1Q9Y587 144 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 A0A1W2PQF6 199 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 NPPBP16860 134 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 SDC1P18827 310 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 COL9A1P20849 921 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 TACR1P25103 407 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 TEAD1P28347 426 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 GRIA3P42263 894 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 GTF2A1P52655 376 aaPredicted RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 EEFSECP57772 596 aaKnown RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 MAPKAPK3Q16644 382 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 OGFRL1Q5TC84 451 aaPredicted RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 OXR1Q8N573 874 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PHC3Q8NDX5 983 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 OR2T34Q8NGX1 318 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 TSSK3Q96PN8 268 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 CGREF1Q99674 301 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PKP2Q99959 881 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 KCTD14Q9BQ13 255 aaPredicted RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 SGPP1Q9BX95 441 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 VPS29Q9UBQ0 182 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 LRCH1Q9Y2L9 728 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 PCDHGA11Q9Y5H2 935 aa18.53■□□□□ 0.56
BRF1-215ENST00000549655 DNMT3AQ9Y6K1 912 aaPredicted RBP18.53■□□□□ 0.56
BRF1-215ENST00000549655 A0A1W2PQU0 124 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 KMOO15229 486 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 KCNH1O95259 989 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 PNLIPRP1P54315 467 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 TAP2Q03519 686 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 METRNLQ641Q3 311 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 NOXRED1Q6NXP6 359 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 TMPRSS11BQ86T26 416 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 LRRC56Q8IYG6 542 aaPredicted RBP18.52■□□□□ 0.56
BRF1-215ENST00000549655 FAM9CQ8IZT9 166 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 OR5AR1Q8NGP9 310 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 TFGQ92734 400 aaPredicted RBP18.52■□□□□ 0.56
BRF1-215ENST00000549655 GTF2H4Q92759 462 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 FAM131CQ96AQ9 280 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 DUS3LQ96G46 650 aaKnown RBP18.52■□□□□ 0.56
BRF1-215ENST00000549655 TRIM15Q9C019 465 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 FBRSQ9HAH7 460 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 PHPT1Q9NRX4 125 aaPredicted RBP18.52■□□□□ 0.56
BRF1-215ENST00000549655 SPATA6Q9NWH7 488 aaPredicted RBP18.52■□□□□ 0.56
BRF1-215ENST00000549655 ACTR3BQ9P1U1 418 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 PIAS3Q9Y6X2 628 aa18.52■□□□□ 0.56
BRF1-215ENST00000549655 ACPPP15309 386 aa18.51■□□□□ 0.55
BRF1-215ENST00000549655 SLC7A1P30825 629 aa18.51■□□□□ 0.55
BRF1-215ENST00000549655 CLNS1AP54105 237 aaKnown RBP18.51■□□□□ 0.55
BRF1-215ENST00000549655 E2F2Q14209 437 aa18.51■□□□□ 0.55
BRF1-215ENST00000549655 GRAMD1BQ3KR37 738 aa18.51■□□□□ 0.55
BRF1-215ENST00000549655 TMEM259Q4ZIN3 620 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms