RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 FMO3P31513 532 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 GANABQ14697 944 aaKnown RBP15.87■□□□□ 0.13
CUX1-213ENST00000549414 POPDC3Q9HBV1 291 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 TLR9Q9NR96 1032 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 EHD3Q9NZN3 535 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 TOR1BO14657 336 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 CCNYL3P0C7X3 344 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 HNMTP50135 292 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.87■□□□□ 0.13
CUX1-213ENST00000549414 AMER2Q8N7J2 671 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 PHC3Q8NDX5 983 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 LCN9Q8WX39 176 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 PEX13Q92968 403 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 YIPF4Q9BSR8 244 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 RNF38Q9H0F5 515 aa15.87■□□□□ 0.13
CUX1-213ENST00000549414 NOL6Q9H6R4 1146 aaKnown RBP15.87■□□□□ 0.13
CUX1-213ENST00000549414 RGS10O43665 173 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 OR6B1O95007 311 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 EBLN1P0CF75 366 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 PGFP49763 221 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MRPL28Q13084 256 aaKnown RBP15.86■□□□□ 0.13
CUX1-213ENST00000549414 PLEKHM3Q6ZWE6 761 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 SLCO6A1Q86UG4 719 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 CAMKK1Q8N5S9 505 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 DPP10Q8N608 796 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 OR4K1Q8NGD4 311 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ADAMTS15Q8TE58 950 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MYLIPQ8WY64 445 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 GORASP1Q9BQQ3 440 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 SPATA5L1Q9BVQ7 753 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 RSPH9Q9H1X1 276 aaPredicted RBP15.86■□□□□ 0.13
CUX1-213ENST00000549414 SMURF2Q9HAU4 748 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 PLGRKTQ9HBL7 147 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 TAC3Q9UHF0 121 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 TSC22D4Q9Y3Q8 395 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 OR10H1Q9Y4A9 318 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 BACE2Q9Y5Z0 518 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ASXL3Q9C0F0 2248 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 KPNA4O00629 521 aaPredicted RBP15.86■□□□□ 0.13
CUX1-213ENST00000549414 TGM5O43548 720 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 BPIP17213 487 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 LRRC70Q7Z2Q7 622 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 CCM2Q9BSQ5 444 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 CRISPLD1Q9H336 500 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 FZD4Q9ULV1 537 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ERVW-1Q9UQF0 538 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 A0A1W2PRB8 838 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 SOCS5O75159 536 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 UGT2B11O75310 529 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 UGT2B17O75795 530 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 PDE9AO76083 593 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ACADVLP49748 655 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 TAS2R41P59536 307 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 RPL26P61254 145 aaKnown RBP15.86■□□□□ 0.13
CUX1-213ENST00000549414 GIPC3Q8TF64 312 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MZB1Q8WU39 189 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 HMGB4Q8WW32 186 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 KAT2AQ92830 837 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 BRINP2Q9C0B6 783 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 GSTO2Q9H4Y5 243 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 KRT87PA6NCN2 255 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 PTSQ03393 145 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 RSBN1Q5VWQ0 802 aaPredicted RBP15.86■□□□□ 0.13
CUX1-213ENST00000549414 NCEH1Q6PIU2 408 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ADGRG2Q8IZP9 1017 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 CHST14Q8NCH0 376 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MDGA1Q8NFP4 955 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 ARRDC2Q8TBH0 407 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 NT5C3BQ969T7 300 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MGME1Q9BQP7 344 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 TREX1Q9NSU2 369 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 MAT2BQ9NZL9 334 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 SPTA1P02549 2419 aa15.86■□□□□ 0.13
CUX1-213ENST00000549414 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 RPS13P62277 151 aaKnown RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 TMEM115Q12893 351 aaPredicted RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 CHMP1BQ7LBR1 199 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 TMEM173Q86WV6 379 aaPredicted RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 LMLNQ96KR4 655 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 KCNK6Q9Y257 313 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 CAPN14A8MX76 684 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 TTC34A8MYJ7 566 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 HEPACAMQ14CZ8 416 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 PDGFRLQ15198 375 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 RGS21Q2M5E4 152 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 TIMM50Q3ZCQ8 353 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 CWF19L1Q69YN2 538 aaKnown RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 GPR65Q8IYL9 337 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 SMYD1Q8NB12 490 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 WDR36Q8NI36 951 aaKnown RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 TFGQ92734 400 aaPredicted RBP15.85■□□□□ 0.13
CUX1-213ENST00000549414 C8orf4Q9NR00 106 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 SPHK2Q9NRA0 654 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 EURLQ9NYK6 297 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 H3BNX3 289 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 MUSKO15146 869 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 ATF6P18850 670 aa15.85■□□□□ 0.13
CUX1-213ENST00000549414 CAPN3P20807 821 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms