RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RFXANKO14593 260 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 FZD6O60353 706 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 STK16O75716 305 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLDN9O95484 217 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SEC24AO95486 1093 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 HOXB9P17482 250 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 FCGRTP55899 365 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLDN8P56748 225 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SYT16Q17RD7 645 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZXDCQ2QGD7 858 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 GPRC6AQ5T6X5 926 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SYT6Q5T7P8 510 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 PLEKHG7Q6ZR37 379 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 RBFAQ8N0V3 343 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 APIPQ96GX9 242 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLIRPQ9GZT3 109 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 RNF38Q9H0F5 515 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 KLHL25Q9H0H3 589 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 RGS10O43665 173 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 ADAMTS4O75173 837 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 EOMESO95936 686 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 CD36P16671 472 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SDC1P18827 310 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 HOXD12P35452 270 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 CREMQ03060 361 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 MAD2L1BPQ15013 274 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 Q6ZPB1 254 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 MYO19Q96H55 970 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 AASDHPPTQ9NRN7 309 aa13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 SCHIP1Q9P0W5 487 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-218ENST00000548919 WNT9AO14904 365 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 WDR47O94967 919 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 SERPINB10P48595 397 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ABHD18Q0P651 414 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 CHRNA6Q15825 494 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ARMC12Q5T9G4 340 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 PIH1D2Q8WWB5 315 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 APOLD1Q96LR9 279 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZFYVE1Q9HBF4 777 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ASIC5Q9NY37 505 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 KIF17Q9P2E2 1029 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 GABRQQ9UN88 632 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 MAN2B2Q9Y2E5 1009 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 SAMHD1Q9Y3Z3 626 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZNF840PA6NDX5 716 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 A8MU76 341 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 CCNDBP1O95273 360 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 FKBP9O95302 570 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 KRT6AP02538 564 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 KRT6BP04259 564 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ACRV1P26436 265 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 TGFBR2P37173 567 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 KRT6CP48668 564 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ARHGDIAP52565 204 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 PRSS36Q5K4E3 855 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 AGAP7PQ5VUJ5 663 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 TMEM53Q6P2H8 277 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 HORMAD1Q86X24 394 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 PLD3Q8IV08 490 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 TM9SF3Q9HD45 589 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ABCB10Q9NRK6 738 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 KRT84Q9NSB2 600 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZNF229Q9UJW7 825 aa13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 NDRG4Q9ULP0 352 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-218ENST00000548919 C2orf78A6NCI8 922 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 PCDHGA12O60330 932 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 WBP4O75554 376 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 CKBP12277 381 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZXDBP98169 803 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 KEAP1Q14145 624 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 SF1Q15637 639 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 SMU1Q2TAY7 513 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ADGRF1Q5T601 910 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 WFDC5Q8TCV5 224 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 PHF10Q8WUB8 498 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 SKA2Q8WVK7 121 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 HTRA1Q92743 480 aa13.74□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZHX1-C8orf76Q96EF9 292 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms