RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 NAA20P61599 178 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 GPR18Q14330 331 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 SETDB1Q15047 1291 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 PHKG1Q16816 387 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 CDCP2Q5VXM1 449 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 UBE2R2Q712K3 238 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 RASGRP3Q8IV61 690 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 LSMEM2Q8N112 164 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 PHC3Q8NDX5 983 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 THOC1Q96FV9 657 aaKnown RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 TRMOQ9BU70 441 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 STN1Q9H668 368 aaKnown RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 PARVBQ9HBI1 364 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 NPHS2Q9NP85 383 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 TMEM9Q9P0T7 183 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 ANGPTL2Q9UKU9 493 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 CLCA2Q9UQC9 943 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-227ENST00000548080 RAP2CQ9Y3L5 183 aa16.86■□□□□ 0.29
HDAC7-227ENST00000548080 D6RAR5 112 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CSO75390 466 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 SUPT7LO94864 414 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 MATN4O95460 622 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CHRNGP07510 517 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 MTHFD1P11586 935 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 PNLIPP16233 465 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 TYRP1P17643 537 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CYP2A7P20853 494 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CD1CP29017 333 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 EEF1DP29692 281 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CSF2RBP32927 897 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CCR10P46092 362 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 PDX1P52945 283 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 ABRQ12979 859 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 PRKAA1Q13131 559 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 CDKL4Q5MAI5 379 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 ANKS6Q68DC2 871 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 SULT1C3Q6IMI6 304 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 RBM44Q6ZP01 1051 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 TMEM26Q6ZUK4 368 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 FRMD7Q6ZUT3 714 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 TMPRSS12Q86WS5 348 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 PDPRQ8NCN5 879 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 C1QTNF3Q9BXJ4 246 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 GSTO2Q9H4Y5 243 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 EML4Q9HC35 981 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 PDE10AQ9Y233 779 aa16.85■□□□□ 0.29
HDAC7-227ENST00000548080 TNPO3Q9Y5L0 923 aaKnown RBP16.85■□□□□ 0.29
HDAC7-227ENST00000548080 LRRC14BA6NHZ5 514 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 PSIP1O75475 530 aaKnown RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 SIX3O95343 332 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 GUCA1CO95843 209 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 RPS17P08708 135 aaKnown RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 KITP10721 976 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 CDK4P11802 303 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 CDKL1Q00532 357 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 CFHR1Q03591 330 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 GALNT1Q10472 559 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 RPA4Q13156 261 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 NR1D2Q14995 579 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 CAPRIN2Q6IMN6 1127 aaKnown RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 GALNT15Q8N3T1 639 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 RFWD2Q8NHY2 731 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 PIWIL2Q8TC59 973 aaKnown RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 MCOLN3Q8TDD5 553 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 FOPNLQ96NB1 174 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 EGFL8Q99944 293 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 SLC40A1Q9NP59 571 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 POT1Q9NUX5 634 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 PNPOQ9NVS9 261 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 HAO1Q9UJM8 370 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 PTBP2Q9UKA9 531 aaKnown RBP16.84■□□□□ 0.29
HDAC7-227ENST00000548080 ARL2BPQ9Y2Y0 163 aa16.84■□□□□ 0.29
HDAC7-227ENST00000548080 PMS2P1A4D2B8 440 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 PABPN1LA6NDY0 278 aaKnown RBP16.83■□□□□ 0.28
HDAC7-227ENST00000548080 HOXB3P14651 431 aaPredicted RBP16.83■□□□□ 0.28
HDAC7-227ENST00000548080 GPR3P46089 330 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 AGTR2P50052 363 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 PRKG2Q13237 762 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 KRT33BQ14525 404 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 PCBP2Q15366 365 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC7-227ENST00000548080 SNAP47Q5SQN1 464 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 PDZD3Q86UT5 571 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 WDR75Q8IWA0 830 aaKnown RBP16.83■□□□□ 0.28
HDAC7-227ENST00000548080 ZNF781Q8N8C0 355 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 DCBLD1Q8N8Z6 715 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 CFAP61Q8NHU2 1237 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 NCSTNQ92542 709 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 RHBDF1Q96CC6 855 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 AHCYL2Q96HN2 611 aaKnown RBP16.83■□□□□ 0.28
HDAC7-227ENST00000548080 FERD3LQ96RJ6 166 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 PLCD4Q9BRC7 762 aa16.83■□□□□ 0.28
HDAC7-227ENST00000548080 SIKE1Q9BRV8 207 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms