RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CREB5Q02930 508 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 PEX6Q13608 980 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 PCLAFQ15004 111 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 UGT3A2Q3SY77 523 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 SLC35D3Q5M8T2 416 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 TMEM211Q6ICI0 200 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 KIF6Q6ZMV9 814 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 SZRD1Q7Z422 152 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 MAATS1Q7Z4T9 603 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 C11orf53Q8IXP5 236 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 RPAP2Q8IXW5 612 aaPredicted RBP3.33□□□□□ -1.88
CCDC38-204ENST00000546816 GUF1Q8N442 669 aaKnown RBP3.33□□□□□ -1.88
CCDC38-204ENST00000546816 AGAP4Q96P64 663 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 GAL3ST4Q96RP7 486 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 MAK16Q9BXY0 300 aaKnown RBP3.33□□□□□ -1.88
CCDC38-204ENST00000546816 MED20Q9H944 212 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 GNB4Q9HAV0 340 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 EQTNQ9NQ60 294 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 CSNK1G3Q9Y6M4 447 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 IGHEP01854 428 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 HLA-FP30511 346 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 GCH1P30793 250 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 CDH13P55290 713 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 EFTUD2Q15029 972 aaKnown RBP eCLIP3.32□□□□□ -1.88
CCDC38-204ENST00000546816 EXT1Q16394 746 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 ZNF74Q16587 644 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 MTHFSDQ2M296 383 aaKnown RBP3.32□□□□□ -1.88
CCDC38-204ENST00000546816 POM121L12Q8N7R1 296 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 PIGBQ92521 554 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 NKX3-1Q99801 234 aaPredicted RBP3.32□□□□□ -1.88
CCDC38-204ENST00000546816 WNT5BQ9H1J7 359 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 SLC35C2Q9NQQ7 365 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 NDE1Q9NXR1 346 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 MAN1B1Q9UKM7 699 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 RARRES3Q9UL19 164 aa3.32□□□□□ -1.88
CCDC38-204ENST00000546816 A6NCN8 305 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 MEIS2O14770 477 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 ZBED4O75132 1171 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 GJB3O75712 270 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 IGHV2-70P01814 119 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 DNASE1P24855 282 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 RXRGP48443 463 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 NAP1L1P55209 391 aaKnown RBP3.31□□□□□ -1.88
CCDC38-204ENST00000546816 XGP55808 180 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 HNRNPKP61978 463 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC38-204ENST00000546816 PSMC6P62333 389 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 C11orf63Q6NUN7 778 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 FRRS1Q6ZNA5 592 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 ARHGAP22Q7Z5H3 698 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 SLC39A11Q8N1S5 342 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 THAP8Q8NA92 274 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 LRRC15Q8TF66 581 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 LPGAT1Q92604 370 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 FAM218AQ96MZ4 157 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 SPAG5Q96R06 1193 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 OPA3Q9H6K4 179 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 TMED3Q9Y3Q3 217 aa3.31□□□□□ -1.88
CCDC38-204ENST00000546816 LOC105371242A0A075B767 164 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 ASB14A6NK59 587 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 SHISA7A6NL88 538 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 DUX4L4P0CJ87 422 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 HAPLN1P10915 354 aaPredicted RBP3.3□□□□□ -1.88
CCDC38-204ENST00000546816 ITIH1P19827 911 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 MPZP25189 248 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 HOXD13P35453 343 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 CES4AQ5XG92 561 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 LEKR1Q6ZMV7 388 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 SLC47A2Q86VL8 602 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 C17orf53Q8N3J3 647 aaPredicted RBP3.3□□□□□ -1.88
CCDC38-204ENST00000546816 OR10S1Q8NGN2 331 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 ATP8B4Q8TF62 1192 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 SKA1Q96BD8 255 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 SLC45A3Q96JT2 553 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 TIGD1Q96MW7 591 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 CCDC3Q9BQI4 270 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 FAM49AQ9H0Q0 323 aaPredicted RBP3.3□□□□□ -1.88
CCDC38-204ENST00000546816 GHITMQ9H3K2 345 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 TLE6Q9H808 572 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC38-204ENST00000546816 DPP3Q9NY33 737 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 FBXO2Q9UK22 296 aaPredicted RBP3.3□□□□□ -1.88
CCDC38-204ENST00000546816 PADI2Q9Y2J8 665 aa3.3□□□□□ -1.88
CCDC38-204ENST00000546816 ARID2Q68CP9 1835 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 LOC100509620A0A075B734 347 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 NEMP2A6NFY4 417 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 FPGTO14772 594 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 GP1BBP13224 206 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 CDC25CP30307 473 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 TSFMP43897 325 aaKnown RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 LBX1P52954 281 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 CLNS1AP54105 237 aaKnown RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 C15orf59Q2T9L4 293 aaPredicted RBP3.29□□□□□ -1.88
CCDC38-204ENST00000546816 GDPGP1Q6ZNW5 385 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 NUP54Q7Z3B4 507 aa3.29□□□□□ -1.88
CCDC38-204ENST00000546816 CERS3Q8IU89 383 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms