RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 LSM14AQ8ND56 463 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 C1orf216Q8TAB5 229 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 SH3YL1Q96HL8 342 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 AARSD1Q9BTE6 412 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MAGEH1Q9H213 219 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MEAF6Q9HAF1 191 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ENAMQ9NRM1 1142 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MARK1Q9P0L2 795 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TFAP2AP05549 437 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 SLC9A5Q14940 896 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MSS51Q4VC12 460 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 EIPR1Q53HC9 387 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MED27Q6P2C8 311 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PDZD9Q8IXQ8 264 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 GPR156Q8NFN8 814 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 UCK2Q9BZX2 261 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 LAMB2P55268 1798 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 CXCL11O14625 94 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 DCKP27707 260 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 NRIP1P48552 1158 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 FGL1Q08830 312 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 CARM1Q86X55 608 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 COMMD2Q86X83 199 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ADAMTS15Q8TE58 950 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TFAP2CQ92754 450 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 UTP4Q969X6 686 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF599Q96NL3 588 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 HCN3Q9P1Z3 774 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
PTCH1-212ENST00000546744 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 ERVW-1Q9UQF0 538 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
PTCH1-212ENST00000546744 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 LCHNA4D1U4 455 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 CLCA1A8K7I4 914 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 IL3P08700 152 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 ICAM3P32942 547 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PRR5P85299 388 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 KCNC4Q03721 635 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 GAD2Q05329 585 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 RBBP4Q09028 425 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 SELPLGQ14242 412 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PAFAH1B3Q15102 231 aaKnown RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 HLA-DQA1Q5Y7H0 255 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 RAB12Q6IQ22 244 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 HSDL2Q6YN16 418 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 FBXO16Q8IX29 292 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 DAW1Q8N136 415 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 FAM98AQ8NCA5 519 aaKnown RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 MOCS1Q9NZB8 636 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 FKBP7Q9Y680 259 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 CAPN14A8MX76 684 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PRODHO43272 600 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 HLA-DQA2P01906 255 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 TACSTD2P09758 323 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 C2orf80Q0P641 193 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 TAF1AQ15573 450 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 OR4C6Q8NH72 309 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 KIAA1191Q96A73 305 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 DERL2Q9GZP9 239 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 FAM118AQ9NWS6 357 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 FBXW11Q9UKB1 542 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 CCDC88AQ3V6T2 1871 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 DISC1C4P0D8 188 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 ALDH2P05091 517 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 H1F0P07305 194 aaKnown RBP12.5□□□□□ -0.41
PTCH1-212ENST00000546744 ETV4P43268 484 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 HSPA7P48741 367 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PGDP52209 483 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 AP1S1P61966 158 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
PTCH1-212ENST00000546744 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms