RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GSTM2P28161 218 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 ABCE1P61221 599 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 BST1Q10588 318 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PROX2Q3B8N5 592 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 MBOAT1Q6ZNC8 495 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 EFL1Q7Z2Z2 1120 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CCNYL1Q8N7R7 359 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PATE1Q8WXA2 126 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 WDR34Q96EX3 536 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SEC16BQ96JE7 1060 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 FAR2Q96K12 515 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 APOLD1Q96LR9 279 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CCT7Q99832 543 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PFDN4Q9NQP4 134 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 INTS7Q9NVH2 962 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 LRIT1Q9P2V4 623 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PIPSLA2A3N6 862 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 WDR91A4D1P6 747 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 TRIM38O00635 465 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 CLGNO14967 610 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SIGLEC6O43699 453 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 DUX1O43812 170 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 PRICKLE3O43900 615 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 UBXN7O94888 489 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SIX3O95343 332 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ESRRBO95718 433 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 CHRM5P08912 532 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 CXCR2P25025 360 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 HNF4AP41235 474 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC1A6P48664 564 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 LIMK1P53667 647 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 MAZP56270 477 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 OCRLQ01968 901 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 GUCY1A3Q02108 690 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 RELAQ04206 551 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 PRDX1Q06830 199 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SPEM2Q0P670 501 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ILKQ13418 452 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 LAPTM5Q13571 262 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 TCEA2Q15560 299 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC5A12Q1EHB4 618 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 PAGE2BQ5JRK9 111 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 LIPJQ5W064 366 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 TCEAL6Q6IPX3 200 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ARMC6Q6NXE6 501 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 RNF165Q6ZSG1 346 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 GOLGA7Q7Z5G4 137 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 C17orf64Q86WR6 236 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 GATAD2AQ86YP4 633 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SPNS2Q8IVW8 549 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ADGRF3Q8IZF5 1079 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 LMNTD1Q8N9Z9 388 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 LINC01555Q8NAE3 123 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 OR10G6Q8NH81 332 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 TCEAL3Q969E4 200 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 UBE2E3Q969T4 207 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 MED8Q96G25 268 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 CDC6Q99741 560 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 EFCAB11Q9BUY7 163 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ILKAPQ9H0C8 392 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 ATG10Q9H0Y0 220 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 IPPKQ9H8X2 491 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 PELI2Q9HAT8 420 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 TRPS1Q9UHF7 1281 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC22A14Q9Y267 594 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 RAP2CQ9Y3L5 183 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 RP1P56715 2156 aa15.48■□□□□ 0.07
PRPF40A-212ENST00000545856 UNC13CQ8NB66 2214 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ZFHX2Q9C0A1 2572 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ASXL3Q9C0F0 2248 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 CDX4O14627 284 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 PPM1DO15297 605 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 TGDSO95455 350 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 HSPA4LO95757 839 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 FGF4P08620 206 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 CDK4P11802 303 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 NPPBP16860 134 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 CMPK1P30085 196 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 SERPINB1P30740 379 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 AGTR2P50052 363 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ZXDCQ2QGD7 858 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 AASDHQ4L235 1098 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 THEMIS2Q5TEJ8 643 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ICE2Q659A1 982 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ATG9BQ674R7 924 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 GPRIN3Q6ZVF9 776 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 TBC1D19Q8N5T2 526 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 TEX9Q8N6V9 391 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 L3MBTL4Q8NA19 623 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ABHD11Q8NFV4 315 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 OR2A1Q8NGT9 310 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC5A11Q8WWX8 675 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 STON2Q8WXE9 905 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC29A3Q9BZD2 475 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 CHRNA10Q9GZZ6 450 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 FSCN3Q9NQT6 498 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 KCNK4Q9NYG8 393 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 ADAM21Q9UKJ8 722 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 TSC22D4Q9Y3Q8 395 aa15.47■□□□□ 0.07
PRPF40A-212ENST00000545856 RNF215Q9Y6U7 377 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms