RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ADPRMQ3LIE5 342 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 DGKKQ5KSL6 1271 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 TMEM150AQ86TG1 271 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 NPAS4Q8IUM7 802 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 RBM12BQ8IXT5 1001 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 BEND7Q8N7W2 519 aaPredicted RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 ZFP90Q8TF47 636 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 UBTD2Q8WUN7 234 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 ATG10Q9H0Y0 220 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 RASSF1Q9NS23 344 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 DNMT3BQ9UBC3 853 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 SLC22A14Q9Y267 594 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 PDE4DIPQ5VU43 2346 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 UGT2B11O75310 529 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 HOXB9P17482 250 aaPredicted RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 VLDLRP98155 873 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 PTCHD3Q3KNS1 767 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 TMEM236Q5W0B7 351 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 CRTC1Q6UUV9 634 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 ANKRD13BQ86YJ7 626 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 OR52E4Q8NGH9 312 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 REXO5Q96IC2 774 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 FAM210AQ96ND0 272 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 NEURL2Q9BR09 285 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 TRIT1Q9H3H1 467 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 MAGIXQ9H6Y5 334 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 ELAC1Q9H777 363 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 AASDHPPTQ9NRN7 309 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 THG1LQ9NWX6 298 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 ASIC5Q9NY37 505 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 CD84Q9UIB8 345 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 INTS6Q9UL03 887 aaKnown RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 YIPF1Q9Y548 306 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 PCDHGA10Q9Y5H3 936 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 SOBPA7XYQ1 873 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 ZNF821O75541 412 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 TPP2P29144 1249 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 RYKP34925 604 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 CTSOP43234 321 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 TOP3AQ13472 1001 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 SMU1Q2TAY7 513 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 LRRC66Q68CR7 880 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 SHQ1Q6PI26 577 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 ZNF621Q6ZSS3 439 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 OVCA2Q8WZ82 227 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 GLMNQ92990 594 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 SCLYQ96I15 445 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 BBS2Q9BXC9 721 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 RMND5AQ9H871 391 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 RDH14Q9HBH5 336 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 PRDM8Q9NQV8 689 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 MAN2B2Q9Y2E5 1009 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 CPQQ9Y646 472 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 GREM1O60565 184 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 CPSF4O95639 269 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 FADS2O95864 444 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 COL6A1P12109 1028 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 PORP16435 677 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 ENGP17813 658 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 PSMB9P28065 219 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 GSSP48637 474 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 MASP1P48740 699 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 ABHD18Q0P651 414 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 BOP1Q14137 746 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 TTLL9Q3SXZ7 439 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 OR2T5Q6IEZ7 315 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 DNAJB7Q7Z6W7 309 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 DCAF4L2Q8NA75 395 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 HJURPQ8NCD3 748 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 OR2T29Q8NH02 315 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 AUTS2Q8WXX7 1259 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 RORBQ92753 470 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 ASIC4Q96FT7 647 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 ZNF347Q96SE7 839 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 SLC29A3Q9BZD2 475 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 REXO4Q9GZR2 422 aaKnown RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 PDP1Q9P0J1 537 aaPredicted RBP15.36■□□□□ 0.05
LDLR-204ENST00000545707 NAALAD2Q9Y3Q0 740 aa15.36■□□□□ 0.05
LDLR-204ENST00000545707 WNT9AO14904 365 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 MT-ND2P03891 347 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 CCDC159P0C7I6 412 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 CD70P32970 193 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 NCS1P62166 190 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 IFITM3Q01628 133 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 GSTM4Q03013 218 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 DDX39BQ13838 428 aaKnown RBP15.35■□□□□ 0.05
LDLR-204ENST00000545707 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 CLECL1Q8IZS7 167 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 RPL3LQ92901 407 aaKnown RBP15.35■□□□□ 0.05
LDLR-204ENST00000545707 CEP295NLQ96MC4 621 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 PANX1Q96RD7 426 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 P2RY13Q9BPV8 354 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 ZNF334Q9HCZ1 680 aaPredicted RBP15.35■□□□□ 0.05
LDLR-204ENST00000545707 KCTD5Q9NXV2 234 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 DAPK2Q9UIK4 370 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms