RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KHDRBS2Q5VWX1 349 aaKnown RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 TXNDC8Q6A555 127 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 NEK5Q6P3R8 708 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 ZNF773Q6PK81 442 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 TPRG1Q6ZUI0 275 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 ZNF598Q86UK7 904 aaKnown RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 PGBD5Q8N414 524 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MCFD2Q8NI22 146 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 AUTS2Q8WXX7 1259 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 ISOC1Q96CN7 298 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 CAPNS2Q96L46 248 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 PRICKLE1Q96MT3 831 aaPredicted RBP5.65□□□□□ -1.51
VPS50-220ENST00000544910 VPS35Q96QK1 796 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 DUSP26Q9BV47 211 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MARCH7Q9H992 704 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 CMTM6Q9NX76 183 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 MTRRQ9UBK8 725 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 VPS51Q9UID3 782 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 BACE2Q9Y5Z0 518 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 NUMBLQ9Y6R0 609 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 SPACA6W5XKT8 324 aa5.65□□□□□ -1.51
VPS50-220ENST00000544910 LOC100130705A0A1B0GUX0 176 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PRSS51A0A1B0GVH4 220 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 M0QX08 132 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SLC16A5O15375 505 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 AOC2O75106 756 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CREG1O75629 220 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 GSRP00390 522 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TSPAN19P0C672 248 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF30P17039 623 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ENGP17813 658 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CAPN3P20807 821 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CST5P28325 142 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 DNAJA1P31689 397 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 CAP1Q01518 475 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TEAD4Q15561 434 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 AFMIDQ63HM1 303 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CDC73Q6P1J9 531 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 NCCRP1Q6ZVX7 275 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 UBE2Q1Q7Z7E8 422 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 THOC6Q86W42 341 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 TRIM48Q8IWZ4 208 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 NXPE1Q8N323 547 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PARP8Q8N3A8 854 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZFP28Q8NHY6 868 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CD200R1Q8TD46 325 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SH3RF2Q8TEC5 729 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 AP2M1Q96CW1 435 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FERD3LQ96RJ6 166 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TCF25Q9BQ70 676 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CCM2Q9BSQ5 444 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZSCAN5AQ9BUG6 496 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FAIM2Q9BWQ8 316 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 INTS7Q9NVH2 962 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF624Q9P2J8 865 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 GJD2Q9UKL4 321 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 BAIAP2Q9UQB8 552 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ENTPD4Q9Y227 616 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 A0A096LPI6 279 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 A0A1W2PRU2 124 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CCNDBP1O95273 360 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PDYNP01213 254 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PRNPP04156 253 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 JUNP05412 331 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 C8AP07357 584 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PTPN2P17706 415 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PTX3P26022 381 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 TGFBR2P37173 567 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 BCAP31P51572 246 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 IST1P53990 364 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SMIM11AP58511 58 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 MYBPC1Q00872 1141 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 GNA13Q14344 377 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PCBP2Q15366 365 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-220ENST00000544910 SKIV2LQ15477 1246 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 SPIN4Q56A73 249 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SPANXN4Q5MJ08 99 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CTSL3PQ5NE16 218 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 PLEKHS1Q5SXH7 462 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FRG2Q64ET8 278 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 NADSYN1Q6IA69 706 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 OR4F3Q6IEY1 312 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TYW3Q6IPR3 259 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 TMEM220Q6QAJ8 160 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 SLC30A8Q8IWU4 369 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 TAMM41Q96BW9 452 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 UBXN10Q96LJ8 280 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FRG2BQ96QU4 278 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ANKRD60Q9BZ19 345 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 TOR3AQ9H497 397 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 CCDC177Q9NQR7 707 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 SDR39U1Q9NRG7 319 aaPredicted RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 MRPS23Q9Y3D9 190 aaKnown RBP5.64□□□□□ -1.51
VPS50-220ENST00000544910 UBE2QL1A1L167 161 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 LEFTY2O00292 366 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 FBP2O00757 339 aa5.64□□□□□ -1.51
VPS50-220ENST00000544910 ZNF195O14628 629 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms