RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PTCHD3Q3KNS1 767 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 NKAIN2Q5VXU1 208 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 METTL2BQ6P1Q9 378 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 ZYG11AQ6WRX3 759 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 ALYREFQ86V81 257 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 SYTL1Q8IYJ3 562 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 FBXO39Q8N4B4 442 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 OR2A1Q8NGT9 310 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 EXT2Q93063 718 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 SLC22A18Q96BI1 424 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 AHCYL2Q96HN2 611 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 OR2A14Q96R47 310 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 C1QTNF3Q9BXJ4 246 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 ATG10Q9H0Y0 220 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 ABCG4Q9H172 646 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 CNOT10Q9H9A5 744 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 ACTR10Q9NZ32 417 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 SEMA5BQ9P283 1151 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 MID2Q9UJV3 735 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 POMT2Q9UKY4 750 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 SNPHO15079 494 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 FKBP9O95302 570 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 GFAPP14136 432 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 TAC1P20366 129 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PRDX3P30048 256 aaKnown RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 PPP1CAP62136 330 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PRKAA1Q13131 559 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 NAE1Q13564 534 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PCLAFQ15004 111 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PFKFB4Q16877 469 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 SLC5A12Q1EHB4 618 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 C18orf21Q32NC0 220 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CAPN13Q6MZZ7 669 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 SUSD1Q6UWL2 747 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 LCTLQ6UWM7 567 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 ZNF574Q6ZN55 896 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 SLCO6A1Q86UG4 719 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PLXDC1Q8IUK5 500 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CARFQ8N187 725 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PTGR2Q8N8N7 351 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 ARMC2Q8NEN0 867 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 NCSTNQ92542 709 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CCDC126Q96EE4 140 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 FAM111AQ96PZ2 611 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CD180Q99467 661 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 MIPEPQ99797 713 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 NUDT22Q9BRQ3 303 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CD244Q9BZW8 370 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PCBD2Q9H0N5 130 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 CCDC177Q9NQR7 707 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 DLL3Q9NYJ7 618 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 WWOXQ9NZC7 414 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 ATXN7L1Q9ULK2 861 aaPredicted RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 ASB1Q9Y576 335 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 PCDHB11Q9Y5F2 797 aa12.63□□□□□ -0.39
DDX11-227ENST00000544652 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
DDX11-227ENST00000544652 ZFHX2Q9C0A1 2572 aaPredicted RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 SPAARA0A1B0GVQ0 90 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 TMEM120BA0PK00 339 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 ISM1B1AKI9 464 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 D6RAR5 112 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 E2F3O00716 465 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 TOX3O15405 576 aaPredicted RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 STK16O75716 305 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 KCNK5O95279 499 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 MYL2P10916 166 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 CPA3P15088 417 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 UGT2B7P16662 529 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 NPPBP16860 134 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 PSMB5P28074 263 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 GCGRP47871 477 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 HSPA7P48741 367 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 AGTR2P50052 363 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 NOVA1P51513 510 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 PRKAA2P54646 552 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 GFERP55789 205 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 DNAJB13P59910 316 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 INSM1Q01101 510 aaPredicted RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 PRDX1Q06830 199 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 AMZ1Q400G9 498 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 PRAMEF13Q5VWM6 474 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 ARMC6Q6NXE6 501 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 SPESP1Q6UW49 350 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 USP53Q70EK8 1073 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 LRRC70Q7Z2Q7 622 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms