RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 OR52E1Q8NGJ3 308 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 SMPDL3AQ92484 453 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 NEIL2Q969S2 332 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 CATSPER2Q96P56 530 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 KIR3DX1Q9H7L2 352 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 RIC8BQ9NVN3 520 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 FANCMQ8IYD8 2048 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 PRAMEF33A0A0G2JMD5 474 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 KDM1AO60341 852 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 CASP2P42575 452 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 DOC2AQ14183 400 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 PRAMEF14Q5SWL7 426 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 THEMIS2Q5TEJ8 643 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 PRAMEF13Q5VWM6 474 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 TAF8Q7Z7C8 310 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 TREML1Q86YW5 311 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 CPSF7Q8N684 471 aaKnown RBP29.44■■■□□ 2.3
CCM2-219ENST00000544363 USP7Q93009 1102 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 HAUS8Q9BT25 410 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 ZNF385DQ9H6B1 395 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 G3BP2Q9UN86 482 aaKnown RBP29.44■■■□□ 2.3
CCM2-219ENST00000544363 SNX6Q9UNH7 406 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 SLC12A4Q9UP95 1085 aa29.44■■■□□ 2.3
CCM2-219ENST00000544363 PRR5-ARHGAP8B1AHC4 643 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 UBDO15205 165 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 CELA2BP08218 269 aaPredicted RBP29.43■■■□□ 2.3
CCM2-219ENST00000544363 NME1P15531 152 aaKnown RBP29.43■■■□□ 2.3
CCM2-219ENST00000544363 PKLRP30613 574 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 E2F2Q14209 437 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 ZRSR2Q15696 482 aaKnown RBP29.43■■■□□ 2.3
CCM2-219ENST00000544363 IYDQ6PHW0 289 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 SLCO4C1Q6ZQN7 724 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 OR2T11Q8NH01 316 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 HMGCLL1Q8TB92 370 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 CXorf40BQ96DE9 158 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 TUBB6Q9BUF5 446 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 ARL8BQ9NVJ2 186 aa29.43■■■□□ 2.3
CCM2-219ENST00000544363 PRR35P0CG20 571 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 LBPP18428 481 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 CD22P20273 847 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 HNF4AP41235 474 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 SLC19A1P41440 591 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 NXPH1P58417 271 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 GRHL2Q6ISB3 625 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 Q6ZSR9 355 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 C11orf74Q86VG3 221 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 TMEM105Q8N8V8 129 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 LINC01555Q8NAE3 123 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 OR2L8Q8NGY9 312 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 LRRC61Q9BV99 259 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 PCBD2Q9H0N5 130 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 ZNF490Q9ULM2 529 aaPredicted RBP29.42■■■□□ 2.3
CCM2-219ENST00000544363 ICKQ9UPZ9 632 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 VILLO15195 856 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 BCAT2O15382 392 aaPredicted RBP29.42■■■□□ 2.3
CCM2-219ENST00000544363 CBX6O95503 412 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 T-ENOLP0DO92 83 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 C1orf61Q13536 156 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 PRRT3Q5FWE3 981 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 TMPRSS11BQ86T26 416 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.42■■■□□ 2.3
CCM2-219ENST00000544363 SLC5A11Q8WWX8 675 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 SH3KBP1Q96B97 665 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 WDR34Q96EX3 536 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 MARK4Q96L34 752 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 HBEGFQ99075 208 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 ELOVL6Q9H5J4 265 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 XKR8Q9H6D3 395 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 FARSBQ9NSD9 589 aaKnown RBP29.42■■■□□ 2.3
CCM2-219ENST00000544363 GIMAP2Q9UG22 337 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 SH2B3Q9UQQ2 575 aa29.42■■■□□ 2.3
CCM2-219ENST00000544363 THADAQ6YHU6 1953 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 TRBV23OR9-2A0A075B6M9 112 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 A0A1W2PPV9 198 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 SLC28A1O00337 649 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 CSNK1EP49674 416 aaKnown RBP29.41■■■□□ 2.3
CCM2-219ENST00000544363 ATG9BQ674R7 924 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 TRIM46Q7Z4K8 759 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 GAB3Q8WWW8 586 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 PTCD3Q96EY7 689 aaKnown RBP29.41■■■□□ 2.3
CCM2-219ENST00000544363 NSL1Q96IY1 281 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 EHD1Q9H4M9 534 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 TXLNGQ9NUQ3 528 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 COPG1Q9Y678 874 aaKnown RBP29.41■■■□□ 2.3
CCM2-219ENST00000544363 CAPN7Q9Y6W3 813 aa29.41■■■□□ 2.3
CCM2-219ENST00000544363 OR5K4A6NMS3 321 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 PEX11AO75192 247 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 ATP5HO75947 161 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 AFF3P51826 1226 aaKnown RBP29.4■■■□□ 2.3
CCM2-219ENST00000544363 SGO1Q5FBB7 561 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 CATSPEREQ5SY80 951 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 FRG2Q64ET8 278 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 OGFOD2Q6N063 350 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 DTWD2Q8NBA8 298 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 SELENOMQ8WWX9 145 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 FRG2BQ96QU4 278 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 MRGBPQ9NV56 204 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 CCL27Q9Y4X3 112 aa29.4■■■□□ 2.3
CCM2-219ENST00000544363 SLC22A2O15244 555 aa29.39■■■□□ 2.3
CCM2-219ENST00000544363 UNC5CO95185 931 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms