RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ARHGDIAP52565 204 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 BCL2L1Q07817 233 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 CBX3Q13185 183 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.15■□□□□ 0.184e-7■■■■□ 24.6
KDM2B-216ENST00000543025 ANKRD46Q86W74 232 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 BADQ92934 168 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 INPP5KQ9BT40 448 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 GABARAPL1Q9H0R8 117 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 PTPRSQ13332 1948 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 SYN1P17600 705 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
KDM2B-216ENST00000543025 PTPN6P29350 595 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 SPAM1P38567 509 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 RPIAP49247 311 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 ACOX1Q15067 660 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 CHRNA6Q15825 494 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 GPR33Q49SQ1 333 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 EGFLAMQ63HQ2 1017 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 BEND7Q8N7W2 519 aaPredicted RBP16.15■□□□□ 0.18
KDM2B-216ENST00000543025 DCAF4L2Q8NA75 395 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 OR7A2PQ8NGA2 310 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 OR10Q1Q8NGQ4 319 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 MCOLN3Q8TDD5 553 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 RORBQ92753 470 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 TESCQ96BS2 214 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 WDR12Q9GZL7 423 aaKnown RBP16.15■□□□□ 0.18
KDM2B-216ENST00000543025 VNN3Q9NY84 501 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 DNMT3BQ9UBC3 853 aaKnown RBP16.15■□□□□ 0.18
KDM2B-216ENST00000543025 INTS6Q9UL03 887 aaKnown RBP16.15■□□□□ 0.18
KDM2B-216ENST00000543025 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
KDM2B-216ENST00000543025 ATP6V1G1O75348 118 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CBSLP0DN79 551 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 EPORP19235 508 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CDH3P22223 829 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CBSP35520 551 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 HNF1BP35680 557 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CDKN2CP42773 168 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CDH18Q13634 790 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 KEAP1Q14145 624 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CDKN3Q16667 212 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 LINC00299Q6ZSB3 139 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 GALNT5Q7Z7M9 940 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CRIPAKQ8N1N5 446 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 NXPE1Q8N323 547 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 BCL7CQ8WUZ0 217 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 TSSK3Q96PN8 268 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 TMEM175Q9BSA9 504 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ELOVL6Q9H5J4 265 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ARL15Q9NXU5 204 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 HECAQ9UBI9 543 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 MTRRQ9UBK8 725 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 FBXO10Q9UK96 956 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 SNX6Q9UNH7 406 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 TPRKBQ9Y3C4 175 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 HSPE1-MOB4S4R3N1 261 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 KPNA4O00629 521 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 RFXANKO14593 260 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 SLC22A1O15245 554 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 MITFO75030 526 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 UGT2B4P06133 528 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 MAPK1P28482 360 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 NSG1P42857 185 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 PGS1Q32NB8 556 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 GGTA1PQ4G0N0 100 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CDKL4Q5MAI5 379 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CAPN13Q6MZZ7 669 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 TTC23LQ6PF05 361 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 PIWIL3Q7Z3Z3 882 aaKnown RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 SLCO6A1Q86UG4 719 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ADGRG2Q8IZP9 1017 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 HJURPQ8NCD3 748 aaPredicted RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 VMP1Q96GC9 406 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ZNF106Q9H2Y7 1883 aaKnown RBP16.14■□□□□ 0.17
KDM2B-216ENST00000543025 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 ERVW-1Q9UQF0 538 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 SCN8AQ9UQD0 1980 aa16.14■□□□□ 0.17
KDM2B-216ENST00000543025 SCAMP3O14828 347 aaKnown RBP16.13■□□□□ 0.17
KDM2B-216ENST00000543025 ZNF682O95780 498 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 BMP1P13497 986 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 PRPH2P23942 346 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 PLD1Q13393 1074 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 TAF12Q16514 161 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 TRIM16LQ309B1 348 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 CARD16Q5EG05 197 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 OR2T5Q6IEZ7 315 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 DOK6Q6PKX4 331 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 B3GNT8Q7Z7M8 397 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 SERPINA11Q86U17 422 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 RNF168Q8IYW5 571 aaPredicted RBP16.13■□□□□ 0.17
KDM2B-216ENST00000543025 OR2T29Q8NH02 315 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 ALG14Q96F25 216 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 RIBC2Q9H4K1 309 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 IL1RAPQ9NPH3 570 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 PPT2Q9UMR5 302 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 TMED5Q9Y3A6 229 aa16.13■□□□□ 0.17
KDM2B-216ENST00000543025 ABHD14A-ACY1A0A1B0GW23 586 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms