RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CCL7P80098 99 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 PCLAFQ15004 111 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 C18orf21Q32NC0 220 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-205ENST00000542541 NKAIN2Q5VXU1 208 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 WDR74Q6RFH5 385 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-205ENST00000542541 LRRC70Q7Z2Q7 622 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 THOC6Q86W42 341 aaKnown RBP22.32■■□□□ 1.16
HOMER3-205ENST00000542541 ARFGAP2Q8N6H7 521 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 LMNTD1Q8N9Z9 388 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 ESAMQ96AP7 390 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 ERVK-6Q9BXR3 956 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 ABCF3Q9NUQ8 709 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 INTS7Q9NVH2 962 aaKnown RBP22.32■■□□□ 1.16
HOMER3-205ENST00000542541 SPHK1Q9NYA1 384 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 SLC22A14Q9Y267 594 aa22.32■■□□□ 1.16
HOMER3-205ENST00000542541 TM4SF5O14894 197 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CCNT2O60583 730 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 TRIM13O60858 407 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CPNE6O95741 557 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 BPGMP07738 259 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CDK4P11802 303 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 KCNA4P22459 653 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 EEF1DP29692 281 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 GDF5P43026 501 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PIK3CGP48736 1102 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 AGTR2P50052 363 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 SF1Q15637 639 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 FBXO48Q5FWF7 155 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PRAMEF13Q5VWM6 474 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 LIPMQ5VYY2 423 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 LCTLQ6UWM7 567 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 USP53Q70EK8 1073 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 C10orf107Q8IVU9 208 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PAIP2Q9BPZ3 127 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CAPS2Q9BXY5 557 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 DNAJC11Q9NVH1 559 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 ANGPTL3Q9Y5C1 460 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 KCNE2Q9Y6J6 123 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 A0A1W2PPV9 198 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 H3BQF6 201 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 K7EPI3 171 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PRICKLE3O43900 615 aaPredicted RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 RFPL3O75679 317 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CCNDBP1O95273 360 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PRDX3P30048 256 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 ALDH3A1P30838 453 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 IRGCQ6NXR0 463 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 NUDCD3Q8IVD9 361 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 OR2A1Q8NGT9 310 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 MGARPQ8TDB4 240 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 PPP4R1Q8TF05 950 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 FAM122AQ96E09 287 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 L3HYPDHQ96EM0 354 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 GFM1Q96RP9 751 aaKnown RBP22.31■■□□□ 1.16
HOMER3-205ENST00000542541 CD180Q99467 661 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 C1QTNF3Q9BXJ4 246 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 TAC3Q9UHF0 121 aa22.31■■□□□ 1.16
HOMER3-205ENST00000542541 A0A1W2PQM1 296 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 CAPN5O15484 640 aaPredicted RBP22.3■■□□□ 1.16
HOMER3-205ENST00000542541 SIX3O95343 332 aaPredicted RBP22.3■■□□□ 1.16
HOMER3-205ENST00000542541 CEACAM1P13688 526 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 EPB42P16452 691 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 UGT2B7P16662 529 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 NPPBP16860 134 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 ABATP80404 500 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 SLC5A12Q1EHB4 618 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 SPESP1Q6UW49 350 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 OR2A14Q96R47 310 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 ACAT2Q9BWD1 397 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 SYNDIG1Q9H7V2 258 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 POMT2Q9UKY4 750 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 DYRK1BQ9Y463 629 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 ANKRD12Q6UB98 2062 aa22.3■■□□□ 1.16
HOMER3-205ENST00000542541 KATNA1O75449 491 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 NEFHP12036 1026 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 CMPK1P30085 196 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 PEBP1P30086 187 aaKnown RBP22.29■■□□□ 1.16
HOMER3-205ENST00000542541 WDR4P57081 412 aaKnown RBP22.29■■□□□ 1.16
HOMER3-205ENST00000542541 PRDX1Q06830 199 aaKnown RBP22.29■■□□□ 1.16
HOMER3-205ENST00000542541 NAA25Q14CX7 972 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 PDK4Q16654 411 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 CFAP157Q5JU67 520 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 ZNF678Q5SXM1 525 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 ICE2Q659A1 982 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 TMEM71Q6P5X7 295 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 SNX31Q8N9S9 440 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 MLXIPLQ9NP71 852 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 GPRC5BQ9NZH0 403 aa22.29■■□□□ 1.16
HOMER3-205ENST00000542541 NTN3O00634 580 aaPredicted RBP22.28■■□□□ 1.16
HOMER3-205ENST00000542541 E2F3O00716 465 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 SUPT7LO94864 414 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 GNAZP19086 355 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 NAGLUP54802 743 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 CDC16Q13042 620 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 SPIDRQ14159 915 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 C17orf64Q86WR6 236 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 CARFQ8N187 725 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 TEX9Q8N6V9 391 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 CCNYL1Q8N7R7 359 aa22.28■■□□□ 1.16
HOMER3-205ENST00000542541 OR2L3Q8NG85 312 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms