RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 GUCA1BQ9UMX6 200 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 HS3ST2Q9Y278 367 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 CHD5Q8TDI0 1954 aa4.42□□□□□ -1.7
MDM2-228ENST00000542502 NUP205Q92621 2012 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 COL4A2P08572 1712 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 GOLGA6L10A0A0M3HER8 536 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 EDDM13A0A1B0GTR0 161 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 LRRD1A4D1F6 860 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TMEM110-MUSTN1A8MSY1 372 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 B4DGG1 531 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 KDELR3O43731 214 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 RRP9O43818 475 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 SKAP2O75563 359 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 PALMO75781 387 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NEBLO76041 1014 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 CHRNB1P11230 501 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 PRLRP16471 622 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 GOT1P17174 413 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TPH1P17752 444 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ERCC2P18074 760 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TGM2P21980 687 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 CCNCP24863 283 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 HLA-FP30511 346 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 OXTRP30559 389 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NUDT1P36639 197 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 OPRD1P41143 372 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 GRK6P43250 576 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TNNT3P45378 269 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 CXCL12P48061 93 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 PTDSS1P48651 473 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 COPAP53621 1224 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 SNRPD1P62314 119 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 RPS24P62847 133 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 POLR2LP62875 67 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 PITX1P78337 314 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 OGDHQ02218 1023 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 IL10RBQ08334 325 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NSUN2Q08J23 767 aaKnown RBP eCLIP4.41□□□□□ -1.7
MDM2-228ENST00000542502 XRCC4Q13426 336 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ENPP2Q13822 863 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 HNRNPDQ14103 355 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 DPYSQ14117 519 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 DPYSL3Q14195 570 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ELAVL3Q14576 367 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 PAFAH1B3Q15102 231 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 PON2Q15165 354 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TAZQ16635 292 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 INSCQ1MX18 579 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TMEM95Q3KNT9 176 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TTC31Q49AM3 519 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 KCNT1Q5JUK3 1230 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 SPDYCQ5MJ68 293 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 SEL1L2Q5TEA6 688 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 FBXO38Q6PIJ6 1188 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 LVRNQ6Q4G3 990 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 COLCA1Q6ZS62 124 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 KIAA0408Q6ZU52 694 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NT5DC3Q86UY8 548 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NLRP14Q86W24 1093 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 CCDC50Q8IVM0 306 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ZNF683Q8IZ20 524 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 SPARTQ8N0X7 666 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NDUFAF2Q8N183 169 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ATPAF2Q8N5M1 289 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 PCDH20Q8N6Y1 951 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 CCDC185Q8N715 623 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 LRRC57Q8N9N7 239 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 HCAR2Q8TDS4 363 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 P3H4Q92791 437 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ARHGEF2Q92974 986 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 IGSF8Q969P0 613 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 FAF2Q96CS3 445 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 HES6Q96HZ4 224 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 PPP1R16AQ96I34 528 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 PRICKLE1Q96MT3 831 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 CSPG4P5Q96PW8 444 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 VAT1Q99536 393 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 GABRG3Q99928 467 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 DESI2Q9BSY9 194 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 TRIM7Q9C029 511 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 FAM234AQ9H0X4 552 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 ZDHHC4Q9NPG8 344 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NECTIN3Q9NQS3 549 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 CWC15Q9P013 229 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 LUZP4Q9P127 313 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 THAP10Q9P2Z0 257 aaPredicted RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 MMP17Q9ULZ9 603 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 NDRG2Q9UN36 371 aaKnown RBP4.41□□□□□ -1.7
MDM2-228ENST00000542502 NCKAP1Q9Y2A7 1128 aa4.41□□□□□ -1.7
MDM2-228ENST00000542502 MUC3AQ02505 3323 aa4.4□□□□□ -1.7
MDM2-228ENST00000542502 MUC6Q6W4X9 2439 aa4.4□□□□□ -1.7
MDM2-228ENST00000542502 GOLGA6L7A0A1B0GV03 622 aa4.4□□□□□ -1.71
MDM2-228ENST00000542502 CTAGE9A4FU28 777 aa4.4□□□□□ -1.71
MDM2-228ENST00000542502 AQP12BA6NM10 295 aa4.4□□□□□ -1.71
MDM2-228ENST00000542502 K7EQS6 105 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms