RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CTSCP53634 463 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 PLTPP55058 493 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 RPL7AP62424 266 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 OGDHQ02218 1023 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 ALDH6A1Q02252 535 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 ZNF844Q08AG5 666 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 TMEM115Q12893 351 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 ZIC1Q15915 447 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 QPCTQ16769 361 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 ANKRD20A8PQ5CZ79 823 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 MARC1Q5VT66 337 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 HIBCHQ6NVY1 386 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 COX15Q7KZN9 410 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 FGD2Q7Z6J4 655 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 AMZ2Q86W34 360 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 CDC20BQ86Y33 519 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 DTWD1Q8N5C7 304 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 METTL27Q8N6F8 245 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 SUN3Q8TAQ9 357 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 PROKR1Q8TCW9 393 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 CCHCR1Q8TD31 782 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 PHF10Q8WUB8 498 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 LRRN4Q8WUT4 740 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 SPSB2Q99619 263 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 VKORC1Q9BQB6 163 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 STMN4Q9H169 189 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 CNOT10Q9H9A5 744 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 KLHL1Q9NR64 748 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 IL17CQ9P0M4 197 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 CTSFQ9UBX1 484 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 RNF6Q9Y252 685 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 MRPS2Q9Y399 296 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 TTLL3Q9Y4R7 772 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 HRH3Q9Y5N1 445 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 NFS1Q9Y697 457 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 FAM237BA0A1B0GVD1 139 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 OR2AG2A6NM03 316 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 GPR89AB7ZAQ6 455 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 MYO1CO00159 1063 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ZSCAN9O15535 394 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 GPR39O43194 453 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 MAP3K7O43318 606 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 PSTPIP1O43586 416 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 VEGFDO43915 354 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 PROSCO94903 275 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 MT-CYBP00156 380 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 HPP00738 406 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TPOP07202 933 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 MSL3P1P0C860 447 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 GPR89BP0CG08 455 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 RARAP10276 462 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 AMPD1P23109 780 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 LSP1P33241 339 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 GABRA4P48169 554 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 CCT5P48643 541 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 MARCKSL1P49006 195 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ARSEP51690 589 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ZNF143P52747 638 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 DLX5P56178 289 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 CAV1Q03135 178 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 CACNG1Q06432 222 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 GTF2H3Q13889 308 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 KRT33BQ14525 404 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TFDP3Q5H9I0 405 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 ZNF766Q5HY98 468 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TTC19Q6DKK2 380 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 AADACL2Q6P093 401 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TMEM220Q6QAJ8 160 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TTLL10Q6ZVT0 673 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 OVCH1Q7RTY7 1134 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 CHERPQ8IWX8 916 aaKnown RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 CARFQ8N187 725 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 BBS5Q8N3I7 341 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 RPRMLQ8N4K4 120 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 TRAM1L1Q8N609 369 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 RASGEF1AQ8N9B8 481 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 BBOF1Q8ND07 529 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 OR2W6PQ8NHA6 318 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 GOT1L1Q8NHS2 421 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 THAP3Q8WTV1 239 aaPredicted RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 MCEEQ96PE7 176 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 SNRNP25Q9BV90 132 aaKnown RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 TDRD1Q9BXT4 1180 aaKnown RBP9.33□□□□□ -0.92
CHFR-220ENST00000541817 TXLNGYQ9BZA5 131 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 XKR8Q9H6D3 395 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 KIR3DX1Q9H7L2 352 aa9.33□□□□□ -0.92
CHFR-220ENST00000541817 PCDH9Q9HC56 1237 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms