RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LETMD1Q6P1Q0 360 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 LRRC70Q7Z2Q7 622 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 FAM46DQ8NEK8 389 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 TWIST2Q8WVJ9 160 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 ATG10Q9H0Y0 220 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 STK38LQ9Y2H1 464 aa26.95■■□□□ 1.9
CCM2-218ENST00000541586 ARL1P40616 181 aaPredicted RBP26.94■■□□□ 1.9
CCM2-218ENST00000541586 CCNG1P51959 295 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 TRAF3Q13114 568 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 SPDYAQ5MJ70 313 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 UNC5DQ6UXZ4 953 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 ATL1Q8WXF7 558 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 PYCR2Q96C36 320 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 CCDC28BQ9BUN5 200 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 STOX2Q9P2F5 926 aaPredicted RBP26.94■■□□□ 1.9
CCM2-218ENST00000541586 ACSL5Q9ULC5 683 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 TIMM22Q9Y584 194 aa26.94■■□□□ 1.9
CCM2-218ENST00000541586 C4orf47A7E2U8 309 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 WDR47O94967 919 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 SLC16A8O95907 504 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 ANXA6P08133 673 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 UROSP10746 265 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 PIK3CGP48736 1102 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 METTL21CQ5VZV1 264 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 OR4F6Q8NGB9 312 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 C19orf60Q96EN9 201 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 SAR1AQ9NR31 198 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 DNAAF2Q9NVR5 837 aaKnown RBP26.93■■□□□ 1.9
CCM2-218ENST00000541586 TAAR2Q9P1P5 351 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 SLC12A4Q9UP95 1085 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 ASF1AQ9Y294 204 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 ANKRD65E5RJM6 399 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 EPORP19235 508 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 SUZ12Q15022 739 aaKnown RBP26.93■■□□□ 1.9
CCM2-218ENST00000541586 FAM91A1Q658Y4 838 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 NXNQ6DKJ4 435 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 AGTRAPQ6RW13 159 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 CDYL2Q8N8U2 506 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 TFGQ92734 400 aaPredicted RBP26.93■■□□□ 1.9
CCM2-218ENST00000541586 TUBB1Q9H4B7 451 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 PRDM8Q9NQV8 689 aa26.93■■□□□ 1.9
CCM2-218ENST00000541586 TRBV23OR9-2A0A075B6M9 112 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 PRR19A6NJB7 356 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 LMO7DNF2Z398 122 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 MYO1CO00159 1063 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 KCNJ13O60928 360 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 KATNA1O75449 491 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 NCF2P19878 526 aaPredicted RBP26.92■■□□□ 1.9
CCM2-218ENST00000541586 IMPA1P29218 277 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 CLCNKAP51800 687 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 UBAP2LQ14157 1087 aaKnown RBP26.92■■□□□ 1.9
CCM2-218ENST00000541586 MILR1Q7Z6M3 343 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 KIAA2013Q8IYS2 634 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 NTMT1Q9BV86 223 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 TBC1D29Q9UFV1 150 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 SLC22A14Q9Y267 594 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 PTGDR2Q9Y5Y4 395 aa26.92■■□□□ 1.9
CCM2-218ENST00000541586 PDZK1P1A8MUH7 402 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 IFRD1O00458 451 aaPredicted RBP26.91■■□□□ 1.9
CCM2-218ENST00000541586 PIP5K1BO14986 540 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 FOXD2O60548 495 aaPredicted RBP26.91■■□□□ 1.9
CCM2-218ENST00000541586 SLC35G4P0C7Q5 338 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 SNX31Q8N9S9 440 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 PHC3Q8NDX5 983 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 ACTRT2Q8TDY3 377 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 C3orf30Q96M34 536 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 CCDC106Q9BWC9 280 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 TRIM33Q9UPN9 1127 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 BTRCQ9Y297 605 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 CSNK1G3Q9Y6M4 447 aa26.91■■□□□ 1.9
CCM2-218ENST00000541586 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 IDSP22304 550 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 CAPRIN2Q6IMN6 1127 aaKnown RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 DDIASQ8IXT1 998 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 EID2Q8N6I1 236 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 OR5AR1Q8NGP9 310 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 OR9A1PQ8NGU1 263 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 CEP70Q8NHQ1 597 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 MAGEC3Q8TD91 643 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 DNAJC11Q9NVH1 559 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 WDR37Q9Y2I8 494 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 CFAP20Q9Y6A4 193 aaKnown RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 CAPN14A8MX76 684 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 B4DGG1 531 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 PCDHGA12O60330 932 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 CHEK2O96017 543 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 CAPN1P07384 714 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 NAE1Q13564 534 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 EFL1Q7Z2Z2 1120 aaKnown RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 KANSL1Q7Z3B3 1105 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 SFTPA2Q8IWL1 248 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 METTL6Q8TCB7 284 aa26.9■■□□□ 1.9
CCM2-218ENST00000541586 SETD7Q8WTS6 366 aaKnown RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 INTS7Q9NVH2 962 aaKnown RBP26.9■■□□□ 1.9
CCM2-218ENST00000541586 ATP6AP2A0A1C7CYW4 349 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 ATP6AP2O75787 350 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 CBX6O95503 412 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 EML2O95834 649 aa26.89■■□□□ 1.9
CCM2-218ENST00000541586 ENO1P06733 434 aaKnown RBP26.89■■□□□ 1.9
CCM2-218ENST00000541586 EBLN1P0CF75 366 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms