RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 NXPE3Q969Y0 559 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ING2Q9H160 280 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 FAM118AQ9NWS6 357 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CD84Q9UIB8 345 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PSME2Q9UL46 239 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 COL4A3Q01955 1670 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 DFNA5O60443 496 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 OCM2P0CE71 109 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 OCMP0CE72 109 aaPredicted RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 GSTM2P28161 218 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 SPINT3P49223 89 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PHEXP78562 749 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 B4GALNT1Q00973 533 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 LAPTM5Q13571 262 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ATP1A4Q13733 1029 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 TUBA3CQ13748 450 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 SPCS2Q15005 226 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 GPSM1Q86YR5 675 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 RAB2BQ8WUD1 216 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PDLIM5Q96HC4 596 aaKnown RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ARMC7Q9H6L4 198 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 INIPQ9NRY2 104 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 TMEM45AQ9NWC5 275 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 TMPRSS11EQ9UL52 423 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 OR7A17O14581 309 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 NOBOXO60393 691 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CLPXO76031 633 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 SLC25A14O95258 325 aaPredicted RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ADH1CP00326 375 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CAPN1P07384 714 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ANXA6P08133 673 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PTPN5P54829 565 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 MEP1AQ16819 746 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 LYPLAL1Q5VWZ2 237 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 BRAT1Q6PJG6 821 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 TRUB1Q8WWH5 349 aaKnown RBP16.72■□□□□ 0.27
SPIDR-227ENST00000541342 ADNPQ9H2P0 1102 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 CD274Q9NZQ7 290 aa16.72■□□□□ 0.27
SPIDR-227ENST00000541342 PRRT4C9JH25 899 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SERPINB7O75635 380 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 TRIM16O95361 564 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SLC44A4Q53GD3 710 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SULT1C3Q6IMI6 304 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 MACC1Q6ZN28 852 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SMARCD2Q92925 531 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 CCDC115Q96NT0 180 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 PAK1IP1Q9NWT1 392 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 CCL27Q9Y4X3 112 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 POLR3HQ9Y535 204 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 PLXNA2O75051 1894 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 BCL10O95999 233 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 AGXTP21549 392 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 FSHRP23945 695 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 NFKBIAP25963 317 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 POLR2LP62875 67 aaKnown RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 NR1D2Q14995 579 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 ABRAXAS2Q15018 415 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 IMPG1Q17R60 797 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 POM121L1PQ3SYA9 428 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 FAM98BQ52LJ0 330 aaKnown RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 IL27RAQ6UWB1 636 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SBSNQ6UWP8 590 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 AURKBQ96GD4 344 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 NEURL2Q9BR09 285 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 OSBPL10Q9BXB5 764 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 PALMDQ9NP74 551 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 IL36AQ9UHA7 158 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 MBD1Q9UIS9 605 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 SLC27A6Q9Y2P4 619 aa16.71■□□□□ 0.27
SPIDR-227ENST00000541342 TCF20Q9UGU0 1960 aaKnown RBP16.71■□□□□ 0.27
SPIDR-227ENST00000541342 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.26
SPIDR-227ENST00000541342 G3V2T6 193 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HPRP00739 348 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 TIMP2P16035 220 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 NNMTP40261 264 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 BCAP31P51572 246 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 RAB15P59190 212 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 PWP1Q13610 501 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 RBM48Q5RL73 367 aaKnown RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 SFTPA1Q8IWL2 248 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 MSRB3Q8IXL7 192 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HDAC2Q92769 488 aaKnown RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 IGFLR1Q9H665 355 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 SELENONQ9NZV5 590 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 A0A1W2PQ67 120 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 TSPAN11A1L157 253 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 NOL3O60936 208 aaKnown RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 SRPRAP08240 638 aaKnown RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 NR4A1P22736 598 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 HTR1BP28222 390 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 IDUAP35475 653 aa16.7■□□□□ 0.26
SPIDR-227ENST00000541342 PPP1R8Q12972 351 aaKnown RBP16.7■□□□□ 0.26
SPIDR-227ENST00000541342 SKIV2LQ15477 1246 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms