RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DCAF1Q9Y4B6 1507 aa5.17□□□□□ -1.58
YBX3-210ENST00000540975 EPHB6O15197 1021 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 NXPH2O95156 264 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 VTNP04004 478 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 RAB40ALP0C0E4 278 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 PAX9P55771 341 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 BECN1Q14457 450 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 MCMDC2Q4G0Z9 681 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 FIP1L1Q6UN15 594 aaKnown RBP5.16□□□□□ -1.58
YBX3-210ENST00000540975 Q6ZRP5 223 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 BTN2A1Q7KYR7 527 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 G2E3Q7L622 706 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 TC2NQ8N9U0 490 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 KRT12Q99456 494 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 RBM4BQ9BQ04 359 aaKnown RBP5.16□□□□□ -1.58
YBX3-210ENST00000540975 NUDT16L1Q9BRJ7 211 aaKnown RBP5.16□□□□□ -1.58
YBX3-210ENST00000540975 PIH1D3Q9NQM4 214 aaKnown RBP5.16□□□□□ -1.58
YBX3-210ENST00000540975 MAN2C1Q9NTJ4 1040 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 TRPV2Q9Y5S1 764 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 FAM169AQ9Y6X4 670 aa5.16□□□□□ -1.58
YBX3-210ENST00000540975 TRIM77I1YAP6 450 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
YBX3-210ENST00000540975 SP100P23497 879 aaPredicted RBP5.15□□□□□ -1.59
YBX3-210ENST00000540975 PTGER4P35408 488 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 CCR3P51677 355 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 VEZF1Q14119 521 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 FASTKD1Q53R41 847 aaKnown RBP5.15□□□□□ -1.59
YBX3-210ENST00000540975 WLSQ5T9L3 541 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 LGI2Q8N0V4 545 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 OR1L3Q8NH93 324 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 VANGL1Q8TAA9 524 aaPredicted RBP5.15□□□□□ -1.59
YBX3-210ENST00000540975 ZNRF4Q8WWF5 429 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 ARSGQ96EG1 525 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 NECTIN4Q96NY8 510 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 UBXN6Q9BZV1 441 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 FAM49AQ9H0Q0 323 aaPredicted RBP5.15□□□□□ -1.59
YBX3-210ENST00000540975 THAP2Q9H0W7 228 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 TLE6Q9H808 572 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 PPP1R3CQ9UQK1 317 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 ARID2Q68CP9 1835 aa5.15□□□□□ -1.59
YBX3-210ENST00000540975 EDDM13A0A1B0GTR0 161 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 C15orf61A6NNL5 157 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 PTGESO14684 152 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 ITGA7Q13683 1181 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 SNTB1Q13884 538 aaKnown RBP5.14□□□□□ -1.59
YBX3-210ENST00000540975 PTPRCAPQ14761 206 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 SLC1A5Q15758 541 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 VWC2Q2TAL6 325 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 CFAP58Q5T655 872 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 BSPRYQ5W0U4 402 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 GPR139Q6DWJ6 353 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 UGT3A1Q6NUS8 523 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 IL27RAQ6UWB1 636 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 ENOSF1Q7L5Y1 443 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 MMD2Q8IY49 270 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 BMPERQ8N8U9 685 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 GPRC5AQ8NFJ5 357 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 CNOT10Q9H9A5 744 aaKnown RBP5.14□□□□□ -1.59
YBX3-210ENST00000540975 RNF150Q9ULK6 438 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 RPS6KL1Q9Y6S9 549 aa5.14□□□□□ -1.59
YBX3-210ENST00000540975 ARPC2O15144 300 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 SPRY1O43609 319 aaPredicted RBP5.13□□□□□ -1.59
YBX3-210ENST00000540975 MAGEC1O60732 1142 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 ZSCAN5DPP0CG00 497 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 CYP2A7P20853 494 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 OPRL1P41146 370 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 POLR2LP62875 67 aaKnown RBP5.13□□□□□ -1.59
YBX3-210ENST00000540975 KLC1Q07866 573 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 ALCAMQ13740 583 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 NECTIN1Q15223 517 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 LETM2Q2VYF4 491 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 PRPF39Q86UA1 669 aaKnown RBP5.13□□□□□ -1.59
YBX3-210ENST00000540975 TTC30BQ8N4P2 665 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 POMGNT2Q8NAT1 580 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 POGLUT1Q8NBL1 392 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 SMAP2Q8WU79 429 aaPredicted RBP5.13□□□□□ -1.59
YBX3-210ENST00000540975 SLCO2A1Q92959 643 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 FEVQ99581 238 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 PKP2Q99959 881 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 CCDC3Q9BQI4 270 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 PIGQQ9BRB3 760 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 DGCR6LQ9BY27 220 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 PANK4Q9NVE7 773 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 WDR83OSQ9Y284 106 aa5.13□□□□□ -1.59
YBX3-210ENST00000540975 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.12□□□□□ -1.59
YBX3-210ENST00000540975 PSMD10O75832 226 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 SEC24AO95486 1093 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 IRF2P14316 349 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 HNF4AP41235 474 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 LHX1P48742 406 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 ALDH3A2P51648 485 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 E2F5Q15329 346 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 PHKG1Q16816 387 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 WDR78Q5VTH9 848 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 DOK6Q6PKX4 331 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 LRRTM1Q86UE6 522 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 OR4K1Q8NGD4 311 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 APOBEC4Q8WW27 367 aaKnown RBP5.12□□□□□ -1.59
YBX3-210ENST00000540975 CENPTQ96BT3 561 aa5.12□□□□□ -1.59
YBX3-210ENST00000540975 USP28Q96RU2 1077 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms