RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 FIGLAQ6QHK4 219 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 ZNF517Q6ZMY9 492 aaPredicted RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 C3orf62Q6ZUJ4 267 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 CTAGE6Q86UF2 777 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 CTAGE4Q8IX94 777 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 PPFIBP2Q8ND30 876 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 CT55Q8WUE5 264 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 SMPDL3AQ92484 453 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 KIAA1143Q96AT1 154 aaPredicted RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 SPRTNQ9H040 489 aaPredicted RBP16.24■□□□□ 0.19
CD9-209ENST00000540891 RHOJQ9H4E5 214 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 PCMTD2Q9NV79 361 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 SERTAD3Q9UJW9 196 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 IKZF3Q9UKT9 509 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 PLCL2Q9UPR0 1127 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 PDE10AQ9Y233 779 aa16.24■□□□□ 0.19
CD9-209ENST00000540891 E7EQ34 232 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 NKX2-8O15522 239 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 ZNF749O43361 778 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 CTSVO60911 334 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 GSTA2P09210 222 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 CCNYL3P0C7X3 344 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 SPTBP11277 2137 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 CYP2A7P20853 494 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 HSD17B2P37059 387 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 RHDQ02161 417 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 SP140Q13342 867 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 ZNF460Q14592 562 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 PHKG1Q16816 387 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
CD9-209ENST00000540891 DSELQ8IZU8 1212 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 MYO1HQ8N1T3 1032 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 STARD8Q92502 1023 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 ZUFSPQ96AP4 578 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 VPS39Q96JC1 886 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 UBL7Q96S82 380 aaPredicted RBP16.23■□□□□ 0.19
CD9-209ENST00000540891 ACAT2Q9BWD1 397 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 ACTR5Q9H9F9 607 aaPredicted RBP16.23■□□□□ 0.19
CD9-209ENST00000540891 SLC6A20Q9NP91 592 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 INTS7Q9NVH2 962 aaKnown RBP16.23■□□□□ 0.19
CD9-209ENST00000540891 NSMCE4AQ9NXX6 385 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 EURLQ9NYK6 297 aa16.23■□□□□ 0.19
CD9-209ENST00000540891 IGKV1-8A0A0C4DH67 115 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 ZNF891A8MT65 544 aaPredicted RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 TARM1B6A8C7 271 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 MEN1O00255 615 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 SLC16A5O15375 505 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 OR2B3O76000 313 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 C8GP07360 202 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 ZNF37AP17032 561 aaPredicted RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 TCN2P20062 427 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 SAT1P21673 171 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 ECHS1P30084 290 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 GCGRP47871 477 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 IL2P60568 153 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 DNASE1L3Q13609 305 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 COL9A2Q14055 689 aaPredicted RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 UBAP2Q5T6F2 1119 aaKnown RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 MBOAT1Q6ZNC8 495 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 MCATQ8IVS2 390 aaKnown RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 CEP97Q8IW35 865 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 ZSCAN1Q8NBB4 408 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 CDKL2Q92772 493 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 EFHD1Q9BUP0 239 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 PARVBQ9HBI1 364 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 STOX2Q9P2F5 926 aaPredicted RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 TAC3Q9UHF0 121 aa16.22■□□□□ 0.19
CD9-209ENST00000540891 MTO1Q9Y2Z2 717 aaKnown RBP16.22■□□□□ 0.19
CD9-209ENST00000540891 OR2A25A4D2G3 310 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ERVH48-1M5A8F1 160 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ATXN7O15265 892 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 WISP3O95389 354 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.19
CD9-209ENST00000540891 ZXDCQ2QGD7 858 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 LINC00303Q3SY05 128 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 KBTBD12Q3ZCT8 623 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 SYTL1Q8IYJ3 562 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 GPR135Q8IZ08 494 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ZNF655Q8N720 491 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 MCOLN3Q8TDD5 553 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 FBF1Q8TES7 1133 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ANKRD49Q8WVL7 239 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 N4BP2L2Q92802 583 aaPredicted RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 MR1Q95460 341 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 PDLIM5Q96HC4 596 aaKnown RBP16.21■□□□□ 0.19
CD9-209ENST00000540891 ZNF285Q96NJ3 590 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 RBBP8Q99708 897 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 CPNE1Q99829 537 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 CHST8Q9H2A9 424 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 SYNPO2LQ9H987 977 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ENAMQ9NRM1 1142 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 PCDHGA6Q9Y5G7 932 aa16.21■□□□□ 0.19
CD9-209ENST00000540891 ZNF839A8K0R7 811 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 C21orf140B9A014 251 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 ZSCAN9O15535 394 aaPredicted RBP16.2■□□□□ 0.18
CD9-209ENST00000540891 CAPN1P07384 714 aa16.2■□□□□ 0.18
CD9-209ENST00000540891 CMPK1P30085 196 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms