RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FDXRP22570 491 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 HTR1EP28566 365 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CCR7P32248 378 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 GRIA3P42263 894 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 OR1D4P47884 311 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ATP5OP48047 213 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 EFNA3P52797 238 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 COPS2P61201 443 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ADORA2A-AS1P86434 159 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TRIM14Q14142 442 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CDSNQ15517 529 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.291e-6■■■■■ 28.8
YBX3-209ENST00000540747 PRTGQ2VWP7 1150 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ODF2Q5BJF6 829 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TCTE1Q5JU00 501 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 IRAK1BP1Q5VVH5 260 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 C11orf63Q6NUN7 778 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 FIGLAQ6QHK4 219 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 SPNS3Q6ZMD2 512 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 RNF44Q7L0R7 432 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 NLRP9Q7RTR0 991 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TAS2R42Q7RTR8 314 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 MRGPRGQ86SM5 289 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TMTC1Q8IUR5 882 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CDKL3Q8IVW4 592 aaPredicted RBP6.97□□□□□ -1.29
YBX3-209ENST00000540747 LRRC8AQ8IWT6 810 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CPAMD8Q8IZJ3 1885 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ARHGEF39Q8N4T4 335 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 OR13J1Q8NGT2 312 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 OR2L8Q8NGY9 312 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 HMGCLL1Q8TB92 370 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 STT3BQ8TCJ2 826 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 LKAAEAR1Q8TD35 194 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 BRIX1Q8TDN6 353 aaKnown RBP6.97□□□□□ -1.29
YBX3-209ENST00000540747 STYXQ8WUJ0 223 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ELMO1Q92556 727 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 C8orf44Q96CB5 159 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 IL17FQ96PD4 163 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 PPP1R2P1Q96PQ5 205 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TREX2Q9BQ50 279 aaPredicted RBP6.97□□□□□ -1.29
YBX3-209ENST00000540747 CRB3Q9BUF7 120 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 HEMGNQ9BXL5 484 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 SYNPO2LQ9H987 977 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 ZNF160Q9HCG1 818 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 CHST11Q9NPF2 352 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 SMARCAL1Q9NZC9 954 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 TDRKHQ9Y2W6 561 aaKnown RBP6.97□□□□□ -1.29
YBX3-209ENST00000540747 ACANP16112 2415 aa6.97□□□□□ -1.29
YBX3-209ENST00000540747 LOC105369274A0A096LPK9 316 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 IGHV1-45A0A0A0MS14 117 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 LOC102723532A0A0G2JNH3 316 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 A0A1W2PPV9 198 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 CCDC162PA2VCL2 907 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 OR2A25A4D2G3 310 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 TARM1B6A8C7 271 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 C19orf84I3L1E1 186 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 KIF2AO00139 706 aaPredicted RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 MAP2K7O14733 419 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 RASGRF2O14827 1237 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 KCNN4O15554 427 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 SRPX2O60687 465 aaPredicted RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 SLCO2B1O94956 709 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 UNC5CO95185 931 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 BMP10O95393 424 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 METTL18O95568 372 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 CELA2AP08217 269 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 RBP3P10745 1247 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 TPH1P17752 444 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 CTNNA1P35221 906 aaKnown RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 CARSP49589 748 aaKnown RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 EMP3P54852 163 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 KRTAP10-9P60411 292 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 ACVR1Q04771 509 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 PRPSAP1Q14558 356 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 BRD3Q15059 726 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 PCOLCEQ15113 449 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 ZC3H12BQ5HYM0 836 aaKnown RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 WASHC2DQ5SRD0 308 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 FRMPD2BQ6IN97 320 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 PRMT9Q6P2P2 845 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 MTFR2Q6P444 385 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 GFRALQ6UXV0 394 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 UNC5DQ6UXZ4 953 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 ZNF534Q76KX8 674 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 NDUFAF7Q7L592 441 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 VSTM4Q8IW00 320 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 DCUN1D3Q8IWE4 304 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 OR4N4Q8N0Y3 316 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 METTL27Q8N6F8 245 aaPredicted RBP6.96□□□□□ -1.3
YBX3-209ENST00000540747 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 DNAJB8Q8NHS0 232 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 ZUFSPQ96AP4 578 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 SLC22A18Q96BI1 424 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 VPS50Q96JG6 964 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 CCDC42Q96M95 316 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.3
YBX3-209ENST00000540747 SELENOSQ9BQE4 189 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms