RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 ZNF624Q9P2J8 865 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 CPNE7Q9UBL6 633 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 DNAJC16Q9Y2G8 782 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 WDR37Q9Y2I8 494 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 PRSS21Q9Y6M0 314 aa8.56□□□□□ -1.04
TRAPPC1-202ENST00000540486 TRGV8A0A0C4DH27 118 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SDR42E2A6NKP2 422 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 KIAA1324LA8MWY0 1029 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 C19orf84I3L1E1 186 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 OR1I1O60431 355 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SNX2O60749 519 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 F3P13726 295 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 RPL10P27635 214 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 AKT1P31749 480 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 RNF144AP50876 292 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SMSP52788 366 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 IST1P53990 364 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SARNPP82979 210 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 CDC16Q13042 620 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 GTF2H3Q13889 308 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 NFE2L1Q14494 772 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 DBN1Q16643 649 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 INSCQ1MX18 579 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ZNF658BQ4V348 819 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 METRNLQ641Q3 311 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 HIBCHQ6NVY1 386 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 RPUSD3Q6P087 351 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 DUS1LQ6P1R4 473 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ABRAXAS1Q6UWZ7 409 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SYDE1Q6ZW31 735 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ZNF572Q7Z3I7 529 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 AMZ2Q86W34 360 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 PRIMA1Q86XR5 153 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 TRAPPC5Q8IUR0 188 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 LILRA3Q8N6C8 439 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 CLDN19Q8N6F1 224 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SIDT2Q8NBJ9 832 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ACBD4Q8NC06 268 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 PPHLN1Q8NEY8 458 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 OR6P1Q8NGX9 317 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ULK4Q96C45 1275 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 LINC00615Q96LM1 132 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 PWWP2AQ96N64 755 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 RUNDC3BQ96NL0 473 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 COPS8Q99627 209 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 TIMM29Q9BSF4 260 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 MRM3Q9HC36 420 aaKnown RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 OLAHQ9NV23 265 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SEMA5BQ9P283 1151 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 MARCH4Q9P2E8 410 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 EPHA6Q9UF33 1036 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ASIC3Q9UHC3 531 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 CDC23Q9UJX2 597 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 SNX24Q9Y343 169 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
TRAPPC1-202ENST00000540486 ZCWPW2A0A1B0GU75 182 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 FAM237BA0A1B0GVD1 139 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 MAGEB16A2A368 324 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 MGAT4DA6NG13 374 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 EFCAB8A8MWE9 144 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 GOLGA8KD6RF30 607 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 GOLGA8TH3BQL2 631 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 PCDH17O14917 1159 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 CD3EAPO15446 510 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 RAD51CO43502 376 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 KIF1CO43896 1103 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 KCNJ13O60928 360 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 BANF1O75531 89 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 URI1O94763 535 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 VAPBO95292 243 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 CLDN14O95500 239 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 FOLR1P15328 257 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 TYRP1P17643 537 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 XRCC1P18887 633 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 IDSP22304 550 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 DNAJA1P31689 397 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 CA7P43166 264 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 ITGA8P53708 1063 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 DRG2P55039 364 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 PRAMEP78395 509 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 DMPKQ09013 629 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 Q0VFX4 171 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 FOXD4Q12950 439 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 GPS2Q13227 327 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 DHX34Q14147 1143 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 ITIH4Q14624 930 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 ZNF169Q14929 603 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 TRADDQ15628 312 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 ANKRD20A4Q4UJ75 823 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 TMEM207Q6UWW9 146 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 WASH2PQ6VEQ5 465 aa8.54□□□□□ -1.04
TRAPPC1-202ENST00000540486 TMEM26Q6ZUK4 368 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms