RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 LRRC6Q86X45 466 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 MPP5Q8N3R9 675 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 C2orf73Q8N5S3 287 aaPredicted RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 ACRBPQ8NEB7 543 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 GSDMBQ8TAX9 411 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 THOC3Q96J01 351 aaKnown RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 SLX1AQ9BQ83 275 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 CRB3Q9BUF7 120 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF304Q9HCX3 659 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 CATSPERZQ9NTU4 200 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 ANKRD12Q6UB98 2062 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 IGLV3-12A0A075B6K2 115 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 A0A1W2PQ72 361 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 TCRBV7S2A1N4TA0A589 114 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 MAP2K7O14733 419 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 LRRTM2O43300 516 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 LIASO43766 372 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 CTSVO60911 334 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 ALOX12BO75342 701 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 USP1O94782 785 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 C1orf105O95561 183 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 STSP08842 583 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 ACPPP15309 386 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 FDXRP22570 491 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 RPS3P23396 243 aaKnown RBP eCLIP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 CCNFP41002 786 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 GRIA1P42261 906 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 EMP3P54852 163 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 VSX2P58304 361 aaPredicted RBP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 OCA2Q04671 838 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 KLC1Q07866 573 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 Q0VFX4 171 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 KIF5AQ12840 1032 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 ZRSR2Q15696 482 aaKnown RBP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 INAQ16352 499 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 C1QL3Q5VWW1 255 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 PTRHD1Q6GMV3 140 aaKnown RBP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 SHISA6Q6ZSJ9 500 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 KIAA1328Q86T90 577 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 KRT222Q8N1A0 295 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 BCORP1Q8N888 145 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 PPHLN1Q8NEY8 458 aaKnown RBP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 OR2L3Q8NG85 312 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 STT3BQ8TCJ2 826 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 MIEF2Q96C03 454 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 HES6Q96HZ4 224 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 CNDP1Q96KN2 507 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 FOPNLQ96NB1 174 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 P2RY12Q9H244 342 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 SPATA7Q9P0W8 599 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF282Q9UDV7 671 aaPredicted RBP11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 CIDEBQ9UHD4 219 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 ENTPD4Q9Y227 616 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 OSGIN2Q9Y236 505 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 CACNA1DQ01668 2161 aa11.47□□□□□ -0.57
CBX3P4-202ENST00000540428 PCDH17O14917 1159 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 CD3EAPO15446 510 aaKnown RBP11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 PHF2O75151 1096 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 FTCDO95954 541 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 IFNB1P01574 187 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ZGLP1P0C6A0 271 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 MUM1Q2TAK8 710 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 PCID2Q5JVF3 399 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ATG9BQ674R7 924 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 FRMPD2BQ6IN97 320 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 OTOAQ7RTW8 1153 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 KBTBD2Q8IY47 623 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 METTL27Q8N6F8 245 aaPredicted RBP11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ATG4AQ8WYN0 398 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 MVB12AQ96EY5 273 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 RAB6BQ9NRW1 208 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 OLAHQ9NV23 265 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 PAK5Q9P286 719 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 MARCH4Q9P2E8 410 aaPredicted RBP11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ZC3H7BQ9UGR2 993 aaKnown RBP11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 C3orf18Q9UK00 162 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 TTC7AQ9ULT0 858 aaPredicted RBP11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF148Q9UQR1 794 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 MAU2Q9Y6X3 613 aa11.46□□□□□ -0.57
CBX3P4-202ENST00000540428 ITPR2Q14571 2701 aa11.46□□□□□ -0.58
CBX3P4-202ENST00000540428 NUP210LQ5VU65 1888 aa11.45□□□□□ -0.58
CBX3P4-202ENST00000540428 NSG1A0A0A6YYJ2 146 aa11.45□□□□□ -0.58
CBX3P4-202ENST00000540428 A0A0J9YVX5 310 aa11.45□□□□□ -0.58
CBX3P4-202ENST00000540428 DYTNA2CJ06 578 aa11.45□□□□□ -0.58
CBX3P4-202ENST00000540428 OR2A25A4D2G3 310 aa11.45□□□□□ -0.58
CBX3P4-202ENST00000540428 AP3B1O00203 1094 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms