RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 CELF5Q8N6W0 485 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 FNDC5Q8NAU1 212 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 C2orf15Q8WU43 125 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 EDEM1Q92611 657 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 SLC30A3Q99726 388 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 FICDQ9BVA6 458 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 UCK2Q9BZX2 261 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 C8orf33Q9H7E9 229 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 EIF2B3Q9NR50 452 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 ERVK13-1Q9NX77 482 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 NUFIP1Q9UHK0 495 aaKnown RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 MAGED1Q9Y5V3 778 aaPredicted RBP8.49□□□□□ -1.05
DDB1-217ENST00000540166 SESN1Q9Y6P5 492 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
DDB1-217ENST00000540166 SUPT3HB4E1H0 165 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PLK4O00444 970 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC22A3O75751 556 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 KCNK2O95069 426 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 AP2A1O95782 977 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 MT-ND2P03891 347 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 HMBSP08397 361 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PRKACGP22612 351 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 NNMTP40261 264 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 DGKEP52429 567 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 EEFSECP57772 596 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 STK11Q15831 433 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 ITPRIPL2Q3MIP1 535 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CATSPEREQ5SY80 951 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CACTIN-AS1Q8N1I8 211 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC44A3Q8N4M1 653 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 ATPAF2Q8N5M1 289 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 AADATQ8N5Z0 425 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 ESX1Q8N693 406 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TXNDC5Q8NBS9 432 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC35F5Q8WV83 523 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 DEDD2Q8WXF8 326 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 C8orf48Q96LL4 319 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 MYADMQ96S97 322 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC30A2Q9BRI3 323 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 ITPAQ9BY32 194 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC22A4Q9H015 551 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PLSCR3Q9NRY6 295 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TMLHEQ9NVH6 421 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 IMPAD1Q9NX62 359 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CMTM6Q9NX76 183 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLCO3A1Q9UIG8 710 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 LYVE1Q9Y5Y7 322 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CLDN5O00501 218 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PSMD3O43242 534 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 GLP2RO95838 553 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 C1QAP02745 245 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC6A2P23975 617 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 VIPR2P41587 438 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PSMD8P48556 350 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TAS2R39P59534 338 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 FOXM1Q08050 763 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PRKG2Q13237 762 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 LAPTM5Q13571 262 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC25A52Q3SY17 297 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 XAF1Q6GPH4 301 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PARP16Q8N5Y8 322 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CDYL2Q8N8U2 506 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 OR2T12Q8NG77 320 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 MYDGFQ969H8 173 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 GPR22Q99680 433 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 NPAP1Q9NZP6 1156 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 INTS6Q9UL03 887 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 SNX6Q9UNH7 406 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 RNF6Q9Y252 685 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 KCNE2Q9Y6J6 123 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 KIAA1217Q5T5P2 1943 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 ERI2A8K979 691 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 PPEF2O14830 753 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 VPS4BO75351 444 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 PTPN3P26045 913 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CLCN5P51795 746 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 BLVRAP53004 296 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 POU6F2P78424 691 aaPredicted RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 CTF1Q16619 201 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TIGD6Q17RP2 521 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CDONQ4KMG0 1287 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 BCL7AQ4VC05 210 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 CACHD1Q5VU97 1274 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 IRAK1BP1Q5VVH5 260 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 GARNL3Q5VVW2 1013 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 ZC3HC1Q86WB0 502 aaKnown RBP8.48□□□□□ -1.05
DDB1-217ENST00000540166 TRIM69Q86WT6 500 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 DENND6AQ8IWF6 608 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TP53INP2Q8IXH6 220 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TCEAL8Q8IYN2 117 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TWIST2Q8WVJ9 160 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 SLC38A4Q969I6 547 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TP53INP1Q96A56 240 aa8.48□□□□□ -1.05
DDB1-217ENST00000540166 TBATAQ96M53 351 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms