RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 OR2AP1Q8NGE2 309 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 DCAF13Q9NV06 445 aaKnown RBP13.28□□□□□ -0.28
BNIP3-202ENST00000540159 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 YY2O15391 372 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 EBLN1P0CF75 366 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SRCP12931 536 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 ENGP17813 658 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 MSH3P20585 1137 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 IGFBP5P24593 272 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 IER5LQ5T953 404 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TMCO5AQ8N6Q1 288 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 ATG16L2Q8NAA4 619 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 MCOLN3Q8TDD5 553 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 MRPL9Q9BYD2 267 aaKnown RBP13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 PDP1Q9P0J1 537 aaPredicted RBP13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TMPRSS11EQ9UL52 423 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 ANGPTL1O95841 491 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 COX7A2P14406 83 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 ACPPP15309 386 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 ETV3P41162 512 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 EPHB3P54753 998 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 XKR6Q5GH73 641 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 TTC23Q5W5X9 447 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 TMEM25Q86YD3 366 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 TMEM132CQ8N3T6 1108 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 GOLM1Q8NBJ4 401 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 RPL3LQ92901 407 aaKnown RBP13.27□□□□□ -0.28
BNIP3-202ENST00000540159 GLMNQ92990 594 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 PDLIM5Q96HC4 596 aaKnown RBP13.27□□□□□ -0.28
BNIP3-202ENST00000540159 NODALQ96S42 347 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 RAPGEFL1Q9UHV5 662 aa13.27□□□□□ -0.28
BNIP3-202ENST00000540159 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 TRIM64CA6NLI5 447 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 H0YAE9 185 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 FPGTO14772 594 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 TEX28O15482 410 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 GREM1O60565 184 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 OPRL1P41146 370 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 NSG1P42857 185 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 DEFB103AP81534 67 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 MEF2AQ02078 507 aaPredicted RBP13.27□□□□□ -0.29
BNIP3-202ENST00000540159 IRF8Q02556 426 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 CDKN3Q16667 212 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 HKDC1Q2TB90 917 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 NDNFQ8TB73 568 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
BNIP3-202ENST00000540159 HTATIP2Q9BUP3 242 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 RBM4Q9BWF3 364 aaKnown RBP13.27□□□□□ -0.29
BNIP3-202ENST00000540159 GORASP2Q9H8Y8 452 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 ZDHHC4Q9NPG8 344 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 POLE4Q9NR33 117 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
BNIP3-202ENST00000540159 SH3BP4Q9P0V3 963 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 KIF17Q9P2E2 1029 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 TMEFF2Q9UIK5 374 aaPredicted RBP13.27□□□□□ -0.29
BNIP3-202ENST00000540159 ORC6Q9Y5N6 252 aa13.27□□□□□ -0.29
BNIP3-202ENST00000540159 E7EQ34 232 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CLIC1O00299 241 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 BCAS1O75363 584 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 OCM2P0CE71 109 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 OCMP0CE72 109 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 LAMP1P11279 417 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 BDKRB1P46663 353 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 OR1E2P47887 323 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CYP2A13Q16696 494 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 IRAK1BP1Q5VVH5 260 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ASTLQ6HA08 431 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 SMYD1Q8NB12 490 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 DDHD1Q8NEL9 900 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ADAMTS16Q8TE57 1224 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NRTNQ99748 197 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CPPED1Q9BRF8 314 aaPredicted RBP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ALOXE3Q9BYJ1 711 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 BRD9Q9H8M2 597 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.29
BNIP3-202ENST00000540159 C16orf96A6NNT2 1141 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CCL16O15467 120 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 URODP06132 367 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 POU2F1P14859 743 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 CD22P20273 847 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 KIR3DL1P43629 444 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 ISL1P61371 349 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NAE1Q13564 534 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
BNIP3-202ENST00000540159 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms