RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 NUMA1Q14980 2115 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 PRR19A6NJB7 356 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SLC28A1O00337 649 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 FFAR3O14843 346 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 AIM2O14862 343 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 GPR42O15529 346 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 LATO43561 262 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 RGS14O43566 566 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 RPN2P04844 631 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SNRPB2P08579 225 aaKnown RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 ACSL1P33121 698 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 CASP2P42575 452 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 KIAA1024LP59773 190 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SNRPNP63162 240 aaKnown RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 ZNF33BQ06732 778 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 LRRC32Q14392 662 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 RPS6KA2Q15349 733 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 NR6A1Q15406 480 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 KIF19Q2TAC6 998 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 PYCR3Q53H96 274 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 WASHC2DQ5SRD0 308 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 LIPJQ5W064 366 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 C16orf89Q6UX73 402 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 GK5Q6ZS86 529 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 Q7L0L9 218 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SYT13Q7L8C5 426 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 FUNDC1Q8IVP5 155 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SCUBE1Q8IWY4 988 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 ULK2Q8IYT8 1036 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 TSPEARQ8WU66 669 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 ZNF480Q8WV37 535 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 RAD51AP1Q96B01 352 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 RCN3Q96D15 328 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 GUCD1Q96NT3 240 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 TIMM29Q9BSF4 260 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 THTPAQ9BU02 230 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SLC25A23Q9BV35 468 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 SGPP1Q9BX95 441 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 MRPL1Q9BYD6 325 aaKnown RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 CD93Q9NPY3 652 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 TM7SF3Q9NS93 570 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 GPRC5BQ9NZH0 403 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 CCDC167Q9P0B6 97 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 EBF1Q9UH73 591 aa9.37□□□□□ -0.91
MDH1-215ENST00000539945 ZNF490Q9ULM2 529 aaPredicted RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
MDH1-215ENST00000539945 A0A088AWK7 358 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 A8MUI8 341 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 IFRD1O00458 451 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 FPGTO14772 594 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 CLGNO14967 610 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 PRAMEF4O60810 478 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 JUPP14923 745 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 IL9P15248 144 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 KELP23276 732 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 HSD17B2P37059 387 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 HNF4AP41235 474 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 NUDT2P50583 147 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 DIO3P55073 304 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 IRF8Q02556 426 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 CHIT1Q13231 466 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 E2F2Q14209 437 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
MDH1-215ENST00000539945 AP5B1Q2VPB7 878 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 PDCD4Q53EL6 469 aaKnown RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 PRAMEF9Q5VWM5 478 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 FRG2Q64ET8 278 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 CAPRIN2Q6IMN6 1127 aaKnown RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 CAPN13Q6MZZ7 669 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 PGM2L1Q6PCE3 622 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 PAOXQ6QHF9 649 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 Q6ZS52 159 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 CHST15Q7LFX5 561 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 GALNT13Q8IUC8 556 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 DCUN1D3Q8IWE4 304 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 LRRC56Q8IYG6 542 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 DEFB107AQ8IZN7 70 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 DSELQ8IZU8 1212 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 FNDC5Q8NAU1 212 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 OR9I1Q8NGQ6 314 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 TFGQ92734 400 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 MED8Q96G25 268 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 FRG2BQ96QU4 278 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 OR4K3Q96R72 315 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 OCSTAMPQ9BR26 566 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 DENND2DQ9H6A0 471 aaPredicted RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 FZD3Q9NPG1 666 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 FARSBQ9NSD9 589 aaKnown RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 ZIM2Q9NZV7 527 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 ASF1AQ9Y294 204 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 MRPS17Q9Y2R5 130 aaKnown RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 KCNE2Q9Y6J6 123 aa9.36□□□□□ -0.91
MDH1-215ENST00000539945 SPTBN5Q9NRC6 3674 aaKnown RBP9.36□□□□□ -0.91
MDH1-215ENST00000539945 KANSL1LA0AUZ9 987 aa9.35□□□□□ -0.91
MDH1-215ENST00000539945 POM121BA6NF01 834 aa9.35□□□□□ -0.91
MDH1-215ENST00000539945 BBIP1A8MTZ0 92 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms