RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MAGEB18Q96M61 343 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 MAGEB5Q9BZ81 275 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 LRRC4CQ9HCJ2 640 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ING3Q9NXR8 418 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 GMPR2Q9P2T1 348 aaKnown RBP12.3□□□□□ -0.44
DDX55-206ENST00000539934 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 FZD10Q9ULW2 581 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 SHOC2Q9UQ13 582 aa12.3□□□□□ -0.44
DDX55-206ENST00000539934 ZNF729A6NN14 1252 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 A8MXE2 369 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ZNF879B4DU55 563 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 HHLA1C9JL84 531 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PLD2O14939 933 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 DNAJA2O60884 412 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CIB2O75838 187 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 LTFP02788 710 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 MLNP12872 115 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PTAFRP25105 342 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 KIR3DL2P43630 455 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 AKR1D1P51857 326 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CASP6P55212 293 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 AP1S1P61966 158 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 RIPPLY1Q0D2K3 151 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 FLOT2Q14254 428 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PON3Q15166 354 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 OTUD1Q5VV17 481 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 FAM91A1Q658Y4 838 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 OR6F1Q8NGZ6 308 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 ZFYVE19Q96K21 471 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 NSMCE2Q96MF7 247 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 COPS4Q9BT78 406 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 SAYSD1Q9NPB0 183 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ENTPD7Q9NQZ7 604 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 C19orf12Q9NSK7 152 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 NINJ2Q9NZG7 142 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CCDC59Q9P031 241 aaKnown RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 LIMD1Q9UGP4 676 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PCDHB7Q9Y5E2 793 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CHD8Q9HCK8 2581 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 MN1Q10571 1320 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 PATJQ8NI35 1801 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 EFCAB7A8K855 629 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ABCD4O14678 606 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 RGS16O15492 202 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 HCRTR2O43614 444 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 IGHV2-70P01814 119 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 GOT1P17174 413 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 NFKB1P19838 968 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 TCN1P20061 433 aaPredicted RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 AMPD1P23109 780 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 G0S2P27469 103 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 DCKP27707 260 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 MAGEA4P43358 317 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 HK3P52790 923 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 BNIP2Q12982 314 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ANKRD54Q6NXT1 300 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 XKRXQ6PP77 449 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CFAP77Q6ZQR2 320 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
DDX55-206ENST00000539934 PPIL6Q8IXY8 311 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 S100ZQ8WXG8 99 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 FAM83CQ9BQN1 747 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 BBS2Q9BXC9 721 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 MMP27Q9H306 513 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 KLHL1Q9NR64 748 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 CD274Q9NZQ7 290 aa12.29□□□□□ -0.44
DDX55-206ENST00000539934 ISPDA4D126 451 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 TADA2AO75478 443 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 CLPXO76031 633 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 CD46P15529 392 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 CLCN5P51795 746 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 MAT1AQ00266 395 aaKnown RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 CDH17Q12864 832 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 FADDQ13158 208 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 EFHC2Q5JST6 749 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 CENPUQ71F23 418 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 HORMAD1Q86X24 394 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 OR5T2Q8NGG2 359 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 RP9Q8TA86 221 aaKnown RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 HM13Q8TCT9 377 aa12.28□□□□□ -0.44
DDX55-206ENST00000539934 PTCD3Q96EY7 689 aaKnown RBP12.28□□□□□ -0.44
DDX55-206ENST00000539934 ROPN1BQ9BZX4 212 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms