RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UPK3BL2E5RIL1 263 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 DCLK1O15075 740 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 ORC5O43913 435 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 NIPSNAP2O75323 286 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 ITGA10O75578 1167 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 ETS2P15036 469 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 MTPNP58546 118 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 CRHR2Q13324 411 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 KCNJ11Q14654 390 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 PUM1Q14671 1186 aaKnown RBP eCLIP6.34□□□□□ -1.4
LSAMP-207ENST00000539563 MYLK3Q32MK0 819 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 KLHL26Q53HC5 615 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 TPRG1Q6ZUI0 275 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 OR2L3Q8NG85 312 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 CPNE2Q96FN4 548 aaPredicted RBP6.34□□□□□ -1.4
LSAMP-207ENST00000539563 PIWIL1Q96J94 861 aaKnown RBP6.34□□□□□ -1.4
LSAMP-207ENST00000539563 FAM84AQ96KN4 292 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 SYT17Q9BSW7 474 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 TRMT61BQ9BVS5 477 aaKnown RBP6.34□□□□□ -1.4
LSAMP-207ENST00000539563 IFT27Q9BW83 186 aa6.34□□□□□ -1.4
LSAMP-207ENST00000539563 LAMA4Q16363 1823 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 M0R2N6 131 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ECI2O75521 394 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NCK1P16333 377 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 GDI1P31150 447 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 GDF10P55107 478 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RPL19P84098 196 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ENPP2Q13822 863 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ALKBH2Q6NS38 261 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PACRGLQ8N7B6 248 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DCBLD1Q8N8Z6 715 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OR2AP1Q8NGE2 309 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DNAJA4Q8WW22 397 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SCGB3A2Q96PL1 93 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 EPYCQ99645 322 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TBL1XR1Q9BZK7 514 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DERL2Q9GZP9 239 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PNO1Q9NRX1 252 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM248Q9NWD8 314 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 EURLQ9NYK6 297 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TFECO14948 347 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CLUP10909 449 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CASP9P55211 416 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DNAJB13P59910 316 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SLC25A11Q02978 314 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RAB30Q15771 203 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ASTE1Q2TB18 679 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 FBXO43Q4G163 708 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CRB2Q5IJ48 1285 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PNLDC1Q8NA58 520 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OR13C4Q8NGS5 318 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ASB9Q96DX5 294 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PYURFQ96I23 114 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 MTERF1Q99551 399 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OR2AG1Q9H205 316 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 POPDC3Q9HBV1 291 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 MCCC2Q9HCC0 563 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZDHHC18Q9NUE0 388 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RGS17Q9UGC6 210 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 FZD4Q9ULV1 537 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CLEC4AQ9UMR7 237 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PRKAB1Q9Y478 270 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 YIPF1Q9Y548 306 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DAPL1A0PJW8 107 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ENGP17813 658 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RPL17P18621 184 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 RPS24P62847 133 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 MERTKQ12866 999 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PDE12Q6L8Q7 609 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM17Q86X19 198 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OR10G2Q8NGC3 310 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CYB5D2Q8WUJ1 264 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CADM1Q9BY67 442 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 C1orf21Q9H246 121 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ANKRA2Q9H9E1 313 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CXorf21Q9HAI6 301 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CPSF4LA6NMK7 179 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 SLC22A1O15245 554 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ADH1BP00325 375 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NELFEP18615 380 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 MAP3K8P41279 467 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ADAM8P78325 824 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CBX3Q13185 183 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 DAG1Q14118 895 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZMYND11Q15326 602 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CA9Q16790 459 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 FBXO48Q5FWF7 155 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NCSTNQ92542 709 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 HTRA1Q92743 480 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 PNPLA2Q96AD5 504 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 GPR22Q99680 433 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 CARS2Q9HA77 564 aaKnown RBP6.33□□□□□ -1.4
LSAMP-207ENST00000539563 NEUROD4Q9HD90 331 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 MEMO1Q9Y316 297 aa6.33□□□□□ -1.4
LSAMP-207ENST00000539563 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms