RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 AUTS2Q8WXX7 1259 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 MYO19Q96H55 970 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 TUBA1CQ9BQE3 449 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 ASB8Q9H765 288 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 PCDHB14Q9Y5E9 798 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 BACE2Q9Y5Z0 518 aa12.25□□□□□ -0.45
SFSWAP-208ENST00000539506 ARNTLO00327 626 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 BCKDKO14874 412 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 AREL1O15033 823 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 RECQL5O94762 991 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 TGM1P22735 817 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 MICU2Q8IYU8 434 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 ARL14EPQ8N8R7 260 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 MUL1Q969V5 352 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 IGSF21Q96ID5 467 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 OSBPL10Q9BXB5 764 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 TNKS2Q9H2K2 1166 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 SLC25A37Q9NYZ2 338 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 M0R129 80 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 PFDN6O15212 129 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 GLUD1P00367 558 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 PCMT1P22061 227 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 KCNC4Q03721 635 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 UBE2UQ5VVX9 321 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 TTC23Q5W5X9 447 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 SUSD1Q6UWL2 747 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CEP68Q76N32 757 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 DNAJB7Q7Z6W7 309 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 ADAMTSL2Q86TH1 951 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CYP4Z1Q86W10 505 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 PLD3Q8IV08 490 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 STK40Q8N2I9 435 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CDC26Q8NHZ8 85 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CLPBQ9H078 707 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 MUC13Q9H3R2 512 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 ZFYVE1Q9HBF4 777 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 TYW5A2RUC4 315 aaKnown RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 S100BP04271 92 aaPredicted RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 UMPSP11172 480 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CD6P30203 668 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 SERPINB1P30740 379 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 DCTP40126 519 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CHRNA6Q15825 494 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 GPRC6AQ5T6X5 926 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 RFLNAQ6ZTI6 216 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 B3GNT8Q7Z7M8 397 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 PROSER1Q86XN7 944 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 GTF2H4Q92759 462 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 RHBDF1Q96CC6 855 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 MRPL9Q9BYD2 267 aaKnown RBP12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 OARD1Q9Y530 152 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 NOX1Q9Y5S8 564 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
SFSWAP-208ENST00000539506 TRIM64BA6NI03 449 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CXCR6O00574 342 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 NPPAP01160 153 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 TRBC1P01850 177 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 JUNBP17275 347 aaPredicted RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 ALOX12P18054 663 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 EPORP19235 508 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 GGT1P19440 569 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 ACRV1P26436 265 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 NUDT6P53370 316 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 PWP1Q13610 501 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 ATAD3BQ5T9A4 648 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 Q6ZNB5 142 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 P2RY8Q86VZ1 359 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 MFSD4AQ8N468 514 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 HDAC2Q92769 488 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 ROGDIQ9GZN7 287 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 PCDHB1Q9Y5F3 818 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 TNPO3Q9Y5L0 923 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 A0A096LPI6 279 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 TRBV5-4A0A0C4DH59 114 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 LOC730098B7Z3J9 87 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CYP7B1O75881 506 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 OTCP00480 354 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 RPS3P23396 243 aaKnown RBP eCLIP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 C21orf33P30042 268 aaPredicted RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CLK1P49759 484 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 PHC1P78364 1004 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 MAPKAPK3Q16644 382 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 DGKKQ5KSL6 1271 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 RBM48Q5RL73 367 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 KIAA1841Q6NSI8 718 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CES5AQ6NT32 575 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 DEFB128Q7Z7B8 93 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 GATAD2AQ86YP4 633 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 DCP2Q8IU60 420 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 DMRTB1Q96MA1 342 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
SFSWAP-208ENST00000539506 SCN8AQ9UQD0 1980 aa12.22□□□□□ -0.45
SFSWAP-208ENST00000539506 SNPHO15079 494 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms