RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 ULK1O75385 1050 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 S100A3P33764 101 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 PIK3CBP42338 1070 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 PIK3CGP48736 1102 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 TBX4P57082 545 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 GPR50Q13585 617 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 ADAMTSL2Q86TH1 951 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 TRIM63Q969Q1 353 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 RMDN1Q96DB5 314 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 CHCHD6Q9BRQ6 235 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 CENPOQ9BU64 300 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 RPS6KA6Q9UK32 745 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 GBF1Q92538 1859 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 CLCA1A8K7I4 914 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 CA12O43570 354 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SEMA3DO95025 777 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SLC19A1P41440 591 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 CRYBB1P53674 252 aaPredicted RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 VLDLRP98155 873 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 MLIPQ5VWP3 458 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 ZNF517Q6ZMY9 492 aaPredicted RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SETD6Q8TBK2 473 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 DMRTB1Q96MA1 342 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 TNKS2Q9H2K2 1166 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SLA2Q9H6Q3 261 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 AASDHPPTQ9NRN7 309 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 FARSBQ9NSD9 589 aaKnown RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 MIOSQ9NXC5 875 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 THUMPD1Q9NXG2 353 aaKnown RBP16.78■□□□□ 0.28
C2CD3-213ENST00000539061 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 MAU2Q9Y6X3 613 aa16.78■□□□□ 0.28
C2CD3-213ENST00000539061 MOXD2PA6NHM9 499 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 E9PQ18 207 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 H3BQ06 376 aaPredicted RBP16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TNFRSF10BO14763 440 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 GPR182O15218 404 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TIE1P35590 1138 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 CLCN4P51793 760 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TTLL9Q3SXZ7 439 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 INO80DQ53TQ3 878 aaPredicted RBP16.77■□□□□ 0.28
C2CD3-213ENST00000539061 ARMCX4Q5H9R4 360 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 NRARPQ7Z6K4 114 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 OR8H2Q8N162 312 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TCAIMQ8N3R3 496 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 DNAJC22Q8N4W6 341 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 GGHQ92820 318 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 IGSF8Q969P0 613 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 PKMYT1Q99640 499 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 SLC30A2Q9BRI3 323 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 INPP5KQ9BT40 448 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 ERVK13-1Q9NX77 482 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 SIRT5Q9NXA8 310 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TBC1D24Q9ULP9 559 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 BOLA1Q9Y3E2 137 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 IGLV3-10A0A075B6K4 115 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 AP3D1O14617 1153 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 FFAR2O15552 330 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 PRAMEF11O60813 436 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 VIPP01282 170 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 BCKDHAP12694 445 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 ACVRL1P37023 503 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 HSPA7P48741 367 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 RGS6P49758 472 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 LIMK1P53667 647 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.28
C2CD3-213ENST00000539061 SGO1Q5FBB7 561 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 DOK6Q6PKX4 331 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TRIM46Q7Z4K8 759 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 FLCNQ8NFG4 579 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 ST13P5Q8NFI4 369 aaPredicted RBP16.77■□□□□ 0.28
C2CD3-213ENST00000539061 GRPEL2Q8TAA5 225 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 COL21A1Q96P44 957 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 PAAF1Q9BRP4 392 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 AMBNQ9NP70 447 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 ZNF490Q9ULM2 529 aaPredicted RBP16.77■□□□□ 0.28
C2CD3-213ENST00000539061 TRAPPC4Q9Y296 219 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.28
C2CD3-213ENST00000539061 MC4RP32245 332 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 RPL9P32969 192 aaKnown RBP16.76■□□□□ 0.27
C2CD3-213ENST00000539061 OLR1P78380 273 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
C2CD3-213ENST00000539061 FBXL22Q6P050 247 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 RNF165Q6ZSG1 346 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 ANKRD46Q86W74 232 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 PSD4Q8NDX1 1056 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 MDGA1Q8NFP4 955 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 OR2A14Q96R47 310 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 PHOX2BQ99453 314 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 RAD9AQ99638 391 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 TSR3Q9UJK0 312 aaKnown RBP16.76■□□□□ 0.27
C2CD3-213ENST00000539061 CFL2Q9Y281 166 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 MICAL3Q7RTP6 2002 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 FAM25AB3EWG3 89 aa16.76■□□□□ 0.27
C2CD3-213ENST00000539061 FAM25CB3EWG5 89 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms