RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PSMB5P28074 263 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 SESN2P58004 480 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 CRADDP78560 199 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 PRAMEF13Q5VWM6 474 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 TTC23LQ6PF05 361 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 LRRC6Q86X45 466 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 HMGCLL1Q8TB92 370 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 ZUFSPQ96AP4 578 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 RAD51AP1Q96B01 352 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 BARD1Q99728 777 aaKnown RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 WDR77Q9BQA1 342 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 MRM3Q9HC36 420 aaKnown RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 CTSFQ9UBX1 484 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 ERRFI1Q9UJM3 462 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 NXT1Q9UKK6 140 aaKnown RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 RUVBL2Q9Y230 463 aaKnown RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 NTNG1Q9Y2I2 539 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 KLK4Q9Y5K2 254 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 SNRNP200O75643 2136 aaKnown RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 NUP210LQ5VU65 1888 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 SEC16AO15027 2179 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 WIPF3A6NGB9 483 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 KPNA5O15131 536 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 NRP2O60462 931 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 LDLRP01130 860 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 ARNTP27540 789 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 NMBRP28336 390 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 CDC25BP30305 580 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 OR1D4P47884 311 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 CCNG2Q16589 344 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 CTSL3PQ5NE16 218 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 MEI1Q5TIA1 1274 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 FRMPD2BQ6IN97 320 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 IGFL2Q6UWQ7 119 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 SHISA6Q6ZSJ9 500 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 OTOAQ7RTW8 1153 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 GAS2L3Q86XJ1 694 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 RAB42Q8N4Z0 105 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 DTWD1Q8N5C7 304 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 OR2L3Q8NG85 312 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 GSDMBQ8TAX9 411 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 PPP4R1Q8TF05 950 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 UBE2Q2Q8WVN8 375 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 MIPEPQ99797 713 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 IL22Q9GZX6 179 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 SOX17Q9H6I2 414 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 TTC7AQ9ULT0 858 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 GUCA1BQ9UMX6 200 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 NOVA2Q9UNW9 492 aaKnown RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 MRFAP1Q9Y605 127 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 COPG1Q9Y678 874 aaKnown RBP11.97□□□□□ -0.49
VAMP1-206ENST00000538970 FAM169AQ9Y6X4 670 aa11.97□□□□□ -0.49
VAMP1-206ENST00000538970 A0A1W2PPV9 198 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 ANKUB1A6NFN9 424 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 VSTM2BA6NLU5 285 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 SRPX2O60687 465 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-206ENST00000538970 NDUFS3O75489 264 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 MED26O95402 600 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 CCNFP41002 786 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 EIF3BP55884 814 aaKnown RBP11.96□□□□□ -0.49
VAMP1-206ENST00000538970 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-206ENST00000538970 BASP1P80723 227 aaKnown RBP11.96□□□□□ -0.49
VAMP1-206ENST00000538970 GBX1Q14549 363 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 RBBP7Q16576 425 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 HIF1AQ16665 826 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 TYSND1Q2T9J0 566 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 FAM214AQ32MH5 1076 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 DRICH1Q6PGQ1 229 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-206ENST00000538970 CNSTQ6PJW8 725 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 RNF44Q7L0R7 432 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 SPC24Q8NBT2 197 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 OR11G2Q8NGC1 345 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 LPGAT1Q92604 370 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 BIRC8Q96P09 236 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 SEMA3GQ9NS98 782 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 SYBUQ9NX95 663 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 BFARQ9NZS9 450 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
VAMP1-206ENST00000538970 ESPL1Q14674 2120 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 A0A0J9YVX5 310 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 HYKKA2RU49 373 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 OR2A25A4D2G3 310 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 AP3B1O00203 1094 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 NIPSNAP2O75323 286 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MATN4O95460 622 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 MGAT1P26572 445 aa11.95□□□□□ -0.5
VAMP1-206ENST00000538970 ATP5DP30049 168 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms