RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C1QTNF3Q9BXJ4 246 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 NUSAP1Q9BXS6 441 aaKnown RBP13.7□□□□□ -0.22
CD4-208ENST00000538827 C20orf27Q9GZN8 174 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 GAREM1Q9H706 876 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 NOL11Q9H8H0 719 aaKnown RBP13.7□□□□□ -0.22
CD4-208ENST00000538827 IL21RQ9HBE5 538 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 PRM3Q9NNZ6 103 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 NPHS2Q9NP85 383 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 MID1IP1Q9NPA3 183 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 STK38LQ9Y2H1 464 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
CD4-208ENST00000538827 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 SPEGQ15772 3267 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 YKT6O15498 198 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 KATNA1O75449 491 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 MLYCDO95822 493 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 EPB42P16452 691 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 SHMT2P34897 504 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 GGT5P36269 586 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 HSD17B2P37059 387 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 RAB28P51157 221 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 UBE2IP63279 158 aaKnown RBP13.69□□□□□ -0.22
CD4-208ENST00000538827 HHEXQ03014 270 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 CDC16Q13042 620 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 GPR18Q14330 331 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 SHBQ15464 509 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 TCEAL6Q6IPX3 200 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 UNQ6494/PRO21346Q6UXR6 183 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 GPRIN3Q6ZVF9 776 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
CD4-208ENST00000538827 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 SFRP1Q8N474 314 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 DCBLD1Q8N8Z6 715 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 AGAP11Q8TF27 550 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 LCN9Q8WX39 176 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 TCEAL3Q969E4 200 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 ILKAPQ9H0C8 392 aaPredicted RBP13.69□□□□□ -0.22
CD4-208ENST00000538827 IPPKQ9H8X2 491 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 ZBTB26Q9HCK0 441 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 PNPOQ9NVS9 261 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 SLC22A14Q9Y267 594 aa13.69□□□□□ -0.22
CD4-208ENST00000538827 FLNBO75369 2602 aaKnown RBP13.69□□□□□ -0.22
CD4-208ENST00000538827 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 TMEM233B4DJY2 109 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 PPP6CO00743 305 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 CLGNO14967 610 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 KHNYNO15037 678 aaKnown RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 SKAP2O75563 359 aaPredicted RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 OR4F21O95013 312 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 OTCP00480 354 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ALPPL2P10696 532 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ERGP11308 486 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 PSMB5P28074 263 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 RXRGP48443 463 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 ARHGAP19Q14CB8 494 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 CYP2A13Q16696 494 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ZXDCQ2QGD7 858 aaPredicted RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 C6orf132Q5T0Z8 1188 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 FAM219BQ5XKK7 198 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ATG14Q6ZNE5 492 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 TMPRSS11BQ86T26 416 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 SYVN1Q86TM6 617 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 KLHDC8AQ8IYD2 350 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 AVL9Q8NBF6 648 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 OR52B6Q8NGF0 335 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 OR2L8Q8NGY9 312 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 SMPDL3AQ92484 453 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 CDK15Q96Q40 435 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ZNF382Q96SR6 550 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ELAC2Q9BQ52 826 aaKnown RBP13.68□□□□□ -0.22
CD4-208ENST00000538827 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 SRMSQ9H3Y6 488 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 PCDHGA5Q9Y5G8 931 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
CD4-208ENST00000538827 E7ENX8 843 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 E7EQ34 232 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 ARHGAP33O14559 1287 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 UBFD1O14562 309 aaKnown RBP13.67□□□□□ -0.22
CD4-208ENST00000538827 OR7A17O14581 309 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 TM4SF5O14894 197 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 GDF9O60383 454 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 NOBOXO60393 691 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
CD4-208ENST00000538827 ENGP17813 658 aa13.67□□□□□ -0.22
CD4-208ENST00000538827 CCND1P24385 295 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms