RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CUL1Q13616 776 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 LONRF1Q17RB8 773 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 KLHL38Q2WGJ6 581 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 NKAIN1Q4KMZ8 207 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 ZNF549Q6P9A3 640 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 TTLL10Q6ZVT0 673 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 LMNTD2Q8IXW0 634 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 RAB42Q8N4Z0 105 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 TEX19Q8NA77 164 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 GIMAP7Q8NHV1 300 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 DHRS4Q9BTZ2 278 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 ACAT2Q9BWD1 397 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 PLAC1Q9HBJ0 212 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 C20orf96Q9NUD7 363 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-202ENST00000538809 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 ASIC3Q9UHC3 531 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 VPS9D1Q9Y2B5 631 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 MRFAP1Q9Y605 127 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 SCN3AQ9NY46 2000 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 A6NL46 340 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 TP73O15350 636 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 CTSVO60911 334 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 PGAM1P18669 254 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 ITGAXP20702 1163 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 ALAS2P22557 587 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 GCGRP47871 477 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 TSTA3Q13630 321 aaPredicted RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 RAPSNQ13702 412 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 CRYMQ14894 314 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 SYDE1Q6ZW31 735 aaPredicted RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 PCGF5Q86SE9 256 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 MRGPREQ86SM8 312 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 DTWD1Q8N5C7 304 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 METTL27Q8N6F8 245 aaPredicted RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 OR2L3Q8NG85 312 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 DLG3Q92796 817 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 C17orf62Q9BQA9 187 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 SELENOSQ9BQE4 189 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 WDR83Q9BRX9 315 aaKnown RBP14.35□□□□□ -0.11
RAB40B-202ENST00000538809 SLC22A11Q9NSA0 550 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 KLHL42Q9P2K6 505 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
RAB40B-202ENST00000538809 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 PTPN13Q12923 2485 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 A0A1B0GX78 115 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 MASP2O00187 686 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 PSIP1O75475 530 aaKnown RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 ERGP11308 486 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 MLLT10P55197 1068 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 VSX2P58304 361 aaPredicted RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 FOXK1P85037 733 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 CYP2A13Q16696 494 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 NADK2Q4G0N4 442 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 FRMPD2BQ6IN97 320 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 SUSD1Q6UWL2 747 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 KCNMB4Q86W47 210 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 IGDCC3Q8IVU1 814 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 PPFIBP2Q8ND30 876 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 FDCSPQ8NFU4 85 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 OR2A1Q8NGT9 310 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 OR9A1PQ8NGU1 263 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 CALML6Q8TD86 181 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 MAGEC3Q8TD91 643 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 KCNJ9Q92806 393 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 RUNDC3BQ96NL0 473 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 EBNA1BP2Q99848 306 aaKnown RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 NUDT9Q9BW91 350 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 CCDC68Q9H2F9 335 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 SLC6A20Q9NP91 592 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 ENAMQ9NRM1 1142 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 IARS2Q9NSE4 1012 aaKnown RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 CUTCQ9NTM9 273 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 FBXO5Q9UKT4 447 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 PCDHGA9Q9Y5G4 932 aaKnown RBP14.34□□□□□ -0.11
RAB40B-202ENST00000538809 KLK4Q9Y5K2 254 aa14.34□□□□□ -0.11
RAB40B-202ENST00000538809 FLNCQ14315 2725 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 A0A0J9YVX5 310 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 CCDC188H7C350 402 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 MYO1CO00159 1063 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 DSCR3O14972 297 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 CEACAM4O75871 244 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 HAUS5O94927 633 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 FKBP9O95302 570 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 MED26O95402 600 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 CATP04040 527 aaKnown RBP14.33□□□□□ -0.12
RAB40B-202ENST00000538809 ARSFP54793 590 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 RRADP55042 308 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 TIAL1Q01085 375 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB40B-202ENST00000538809 DR1Q01658 176 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 MORF4L2Q15014 288 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 TTLL9Q3SXZ7 439 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 HSP90AA5PQ58FG0 334 aa14.33□□□□□ -0.12
RAB40B-202ENST00000538809 HIBCHQ6NVY1 386 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms