RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ICKQ9UPZ9 632 aa16.69■□□□□ 0.26
CLN6-202ENST00000538696 ZNF195O14628 629 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 TAPBPO15533 448 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 GUCA1CO95843 209 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 ALOX15P16050 662 aaPredicted RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 CKMT2P17540 419 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 MAP4P27816 1152 aaKnown RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 PKLRP30613 574 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 DUSP3P51452 185 aaPredicted RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 IFT88Q13099 833 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 ANKS6Q68DC2 871 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 WDR75Q8IWA0 830 aaKnown RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 OR6C4Q8NGE1 309 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 MAGEC3Q8TD91 643 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 NAT6Q93015 286 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 RAD51AP1Q96B01 352 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 C1QTNF3Q9BXJ4 246 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 XKR8Q9H6D3 395 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 RDH14Q9HBH5 336 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 TNFRSF12AQ9NP84 129 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 ABCF3Q9NUQ8 709 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 EVA1BQ9NVM1 165 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 KCNK4Q9NYG8 393 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 SPATA7Q9P0W8 599 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 PCTPQ9UKL6 214 aa16.68■□□□□ 0.26
CLN6-202ENST00000538696 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.68■□□□□ 0.26
CLN6-202ENST00000538696 PCNX2A6NKB5 2137 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
CLN6-202ENST00000538696 TMEM233B4DJY2 109 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 UBFD1O14562 309 aaKnown RBP16.67■□□□□ 0.26
CLN6-202ENST00000538696 PNLIPP16233 465 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 ACP1P24666 158 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 RPL14P50914 215 aaKnown RBP16.67■□□□□ 0.26
CLN6-202ENST00000538696 PLCL1Q15111 1095 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 SH2D4BQ5SQS7 431 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 LMNTD1Q8N9Z9 388 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 DEFB124Q8NES8 71 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 OR9A1PQ8NGU1 263 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 IFI44Q8TCB0 444 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 MCOLN3Q8TDD5 553 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 UBTD2Q8WUN7 234 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 SLC38A3Q99624 504 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 CDC6Q99741 560 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 EGFL8Q99944 293 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 EBF4Q9BQW3 602 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 TMEM79Q9BSE2 394 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 TRMOQ9BU70 441 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.67■□□□□ 0.26
CLN6-202ENST00000538696 WWOXQ9NZC7 414 aa16.67■□□□□ 0.26
CLN6-202ENST00000538696 PTBP2Q9UKA9 531 aaKnown RBP16.67■□□□□ 0.26
CLN6-202ENST00000538696 PCM1Q15154 2024 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 CCT8L1PA6NM43 557 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 PPP6CO00743 305 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 TM4SF5O14894 197 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 HGSO14964 777 aaPredicted RBP16.66■□□□□ 0.26
CLN6-202ENST00000538696 CASC3O15234 703 aaKnown RBP16.66■□□□□ 0.26
CLN6-202ENST00000538696 HIST1H2AGP0C0S8 130 aaPredicted RBP16.66■□□□□ 0.26
CLN6-202ENST00000538696 ERGP11308 486 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 HIST1H2ADP20671 130 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 ACADVLP49748 655 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 RAB28P51157 221 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 EPHA4P54764 986 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 AP1S2P56377 157 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 OR1D5P58170 312 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 CDKL1Q00532 357 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 CLCQ05315 142 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 PCBP2Q15366 365 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN6-202ENST00000538696 VWA5B1Q5TIE3 1220 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 SPRED1Q7Z699 444 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 Q8N9G6 341 aaPredicted RBP16.66■□□□□ 0.26
CLN6-202ENST00000538696 TRPC4APQ8TEL6 797 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 LCN9Q8WX39 176 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 RHBDF1Q96CC6 855 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 HIST1H2AHQ96KK5 128 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 HIST1H2AJQ99878 128 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 PLCD4Q9BRC7 762 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 SIKE1Q9BRV8 207 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 H2AFJQ9BTM1 129 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 TRIM54Q9BYV2 358 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 EML4Q9HC35 981 aaKnown RBP16.66■□□□□ 0.26
CLN6-202ENST00000538696 ARL15Q9NXU5 204 aa16.66■□□□□ 0.26
CLN6-202ENST00000538696 UNC13CQ8NB66 2214 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 PTPRZ1P23471 2315 aaPredicted RBP16.65■□□□□ 0.26
CLN6-202ENST00000538696 MATN2O00339 956 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 SLC30A4O14863 429 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 B4GAT1O43505 415 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 TNFSF14O43557 240 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 KDM1AO60341 852 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
CLN6-202ENST00000538696 IMPA1P29218 277 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 SHMT2P34897 504 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 GPR3P46089 330 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 HSPA7P48741 367 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 IDH3AP50213 366 aa16.65■□□□□ 0.26
CLN6-202ENST00000538696 GALNT1Q10472 559 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms