RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 NAA20P61599 178 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FRG2Q64ET8 278 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 GPR156Q8NFN8 814 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 PPP3R2Q96LZ3 170 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FOPNLQ96NB1 174 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FRG2BQ96QU4 278 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 PKP2Q99959 881 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 DFNA5O60443 496 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 TPST1O60507 370 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 MT-ND1P03886 318 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 PSMB5P28074 263 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 COX14Q96I36 57 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 IKZF5Q9H5V7 419 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 LRRC42Q9Y546 428 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 ARHGEF17Q96PE2 2063 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-205ENST00000538545 TDRD6O60522 2096 aaKnown RBP13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FRYLO94915 3013 aa13.69□□□□□ -0.22
ACTN1-205ENST00000538545 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SLC16A5O15375 505 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 GRAMD1BQ3KR37 738 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 BCL7AQ4VC05 210 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 USP39Q53GS9 565 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 THEMIS2Q5TEJ8 643 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 NEK10Q6ZWH5 1172 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 OR2L2Q8NH16 312 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 TMEM125Q96AQ2 219 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 RSRC1Q96IZ7 334 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 CCDC138Q96M89 665 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 DPY30Q9C005 99 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ZCCHC2Q9C0B9 1178 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 KCNK12Q9HB15 430 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ZIM2Q9NZV7 527 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 PCDHA9Q9Y5H5 950 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 GRXCR2A6NFK2 248 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SLC28A1O00337 649 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 QSOX1O00391 747 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 C5AR1P21730 350 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 AQP4P55087 323 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ZNF776Q68DI1 518 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 AMIGO2Q86SJ2 522 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 C10orf111Q8N326 155 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 L3MBTL4Q8NA19 623 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 JPH3Q8WXH2 748 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 JADE3Q92613 823 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SLCO4A1Q96BD0 722 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 OR52A5Q9H2C5 316 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SGK2Q9HBY8 427 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 PFDN4Q9NQP4 134 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 PPT2Q9UMR5 302 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SNX6Q9UNH7 406 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 KANSL1LA0AUZ9 987 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 POM121BA6NF01 834 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 MGAT4DA6NG13 374 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 EEDO75530 441 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 NPPBP16860 134 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SDC1P18827 310 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ACADLP28330 430 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ACSL1P33121 698 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 CLCNKAP51800 687 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 SAMD4BQ5PRF9 694 aaKnown RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 AAGABQ6PD74 315 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 NUDT18Q6ZVK8 323 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 PHACTR4Q8IZ21 702 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 TCAIMQ8N3R3 496 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 RPLP0P6Q8NHW5 317 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 CANT1Q8WVQ1 401 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 LRTOMTQ8WZ04 291 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 ROPN1LQ96C74 230 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 WDR26Q9H7D7 661 aa13.68□□□□□ -0.22
ACTN1-205ENST00000538545 LEF1Q9UJU2 399 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-205ENST00000538545 OR52A4PA6NMU1 304 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 VGLL3A8MV65 326 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 LIN7AO14910 233 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-205ENST00000538545 DNTTP04053 509 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 JUPP14923 745 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 OXTRP30559 389 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 MTHFRP42898 656 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 GSK3BP49841 420 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 ADPRHP54922 357 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 TAP2Q03519 686 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 LIPEQ05469 1076 aa13.67□□□□□ -0.22
ACTN1-205ENST00000538545 PGS1Q32NB8 556 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms