RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ENOPH1Q9UHY7 261 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
USP28-207ENST00000538475 TSPAN16Q9UKR8 245 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TNFSF13BQ9Y275 285 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 DERAQ9Y315 318 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 HES2Q9Y543 173 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 DNAJC15Q9Y5T4 150 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 RNF215Q9Y6U7 377 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PHIPQ8WWQ0 1821 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 COL1A2P08123 1366 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 GREB1Q4ZG55 1949 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 PRAMEF27A3QJZ7 478 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 C12orf71A8MTZ7 269 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 LEUTXA8MZ59 168 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FAM220BPB1ANY3 271 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 H0YC42 278 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ANKRD28O15084 1053 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 NDUFA2O43678 99 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 HS6ST1O60243 411 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 SERPINI2O75830 405 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CYP7B1O75881 506 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 OR7A10O76100 309 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 C1RP00736 705 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ITGB3P05106 788 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 PRKCBP05771 671 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CAPN1P07384 714 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 UROSP10746 265 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 HGFP14210 728 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 TCF3P15923 654 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 GOT1P17174 413 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FPR1P21462 350 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 AGXTP21549 392 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CFL1P23528 166 aaKnown RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 CHMP24386 653 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CCNCP24863 283 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 YWHAQP27348 245 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 NMBRP28336 390 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CYP2C18P33260 490 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 KCNC1P48547 511 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MASP1P48740 699 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 TUFMP49411 452 aaKnown RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 SUOXP51687 545 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MAPK12P53778 367 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 BCAT1P54687 386 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 OR4D2P58180 307 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 MAD2L1Q13257 205 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 CAPSQ13938 189 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 KCNC3Q14003 757 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 GOLGA7BQ2TAP0 167 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 LEXMQ3ZCV2 418 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CERCAMQ5T4B2 595 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FAM205BPQ63HN1 556 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 PRR5LQ6MZQ0 368 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MZT2BQ6NZ67 158 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 METAP1DQ6UB28 335 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 CES3Q6UWW8 571 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 DLEU7Q6UYE1 221 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ZNF367Q7RTV3 350 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 LIMS2Q7Z4I7 341 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ZBTB46Q86UZ6 589 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 GATAD2AQ86YP4 633 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CEP97Q8IW35 865 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 RBFAQ8N0V3 343 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CADM2Q8N3J6 435 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 TOP6BLQ8N6T0 577 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CELF2-AS1Q8N7Q2 184 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FNDC5Q8NAU1 212 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FAM83FQ8NEG4 500 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 APPL2Q8NEU8 664 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ZMIZ2Q8NF64 920 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 OR2T12Q8NG77 320 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 DNAJB14Q8TBM8 379 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FAM110BQ8TC76 370 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 NSUN6Q8TEA1 469 aaKnown RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 DEDD2Q8WXF8 326 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 SNAPC3Q92966 411 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FATE1Q969F0 183 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 CIDECQ96AQ7 238 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 TUBGCP3Q96CW5 907 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ATXN7L3BQ96GX2 97 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 METTL2AQ96IZ6 378 aaKnown RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 MAP6Q96JE9 813 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ZNF599Q96NL3 588 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 PSKH2Q96QS6 385 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 TAAR1Q96RJ0 339 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 OMDQ99983 421 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 MLPHQ9BV36 600 aaPredicted RBP6.53□□□□□ -1.36
USP28-207ENST00000538475 MAGEB5Q9BZ81 275 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ROGDIQ9GZN7 287 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 PPA2Q9H2U2 334 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 FZD8Q9H461 694 aa6.53□□□□□ -1.36
USP28-207ENST00000538475 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms