RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 CHST11Q9NPF2 352 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 INTS7Q9NVH2 962 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 STOX2Q9P2F5 926 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 TFR2Q9UP52 801 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MTORP42345 2549 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 HYKKA2RU49 373 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 PJA2O43164 708 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 NRP2O60462 931 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 CTSVO60911 334 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 S1PR4O95977 384 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 TPM1P09493 284 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 ZGLP1P0C6A0 271 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 PRR35P0CG20 571 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 MST1P26927 711 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 SOX11P35716 441 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 PLOD1Q02809 727 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 INAQ16352 499 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 CCDC38Q502W7 563 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 DNAJC21Q5F1R6 531 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 CNSTQ6PJW8 725 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 SLC22A15Q8IZD6 547 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 TAB3Q8N5C8 712 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 STYXQ8WUJ0 223 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
SMARCA4-206ENST00000538456 CCDC162PA2VCL2 907 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FITM1A5D6W6 292 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FFAR3O14843 346 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 GPR42O15529 346 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 RPN2P04844 631 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 EIF2S1P05198 315 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 CELA2AP08217 269 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 COX6A1P12074 109 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 PSMB5P28074 263 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 CCR7P32248 378 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FOXN2P32314 431 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 CA7P43166 264 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 GRB7Q14451 532 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 KCTD11Q693B1 232 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FAAH2Q6GMR7 532 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 NDUFAF7Q7L592 441 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 DCUN1D3Q8IWE4 304 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 OR2L8Q8NGY9 312 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 LKAAEAR1Q8TD35 194 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 PSMF1Q92530 271 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 ZNF285Q96NJ3 590 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 MIPEPQ99797 713 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 LRRC40Q9H9A6 602 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 ZC3H7BQ9UGR2 993 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 SLC39A10Q9ULF5 831 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
SMARCA4-206ENST00000538456 NF1P21359 2839 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 LOC105369274A0A096LPK9 316 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 LOC102723532A0A0G2JNH3 316 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 A0A0J9YVX5 310 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 KRT87PA6NCN2 255 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 RASAL1O95294 804 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 METTL18O95568 372 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 WDPCPO95876 746 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 SERPINA7P05543 415 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 COPS2P61201 443 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 PMP22Q01453 160 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 ATG9BQ674R7 924 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 C11orf63Q6NUN7 778 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 OR4N4Q8N0Y3 316 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 HAS2Q92819 552 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 YIPF2Q9BWQ6 316 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 OSBPL8Q9BZF1 889 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 ABI3Q9P2A4 366 aa13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-206ENST00000538456 IDSB3KWA1 339 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 RASGRF2O14827 1237 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 WFS1O76024 890 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 CRYABP02511 175 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 ERVK-10P10266 1014 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 FDXRP22570 491 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 CXCR2P25025 360 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 MAGEA1P43355 309 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 HIBCHQ6NVY1 386 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 AADACL2Q6P093 401 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 UNC5DQ6UXZ4 953 aa13.34□□□□□ -0.27
SMARCA4-206ENST00000538456 KLHDC8BQ8IXV7 354 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms