RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 ZNF501Q96CX3 271 aaPredicted RBP12.72□□□□□ -0.37
COPS7A-207ENST00000538375 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
COPS7A-207ENST00000538375 SLC12A9Q9BXP2 914 aa12.72□□□□□ -0.37
COPS7A-207ENST00000538375 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
COPS7A-207ENST00000538375 UTP6Q9NYH9 597 aaKnown RBP12.72□□□□□ -0.37
COPS7A-207ENST00000538375 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
COPS7A-207ENST00000538375 PDE10AQ9Y233 779 aa12.72□□□□□ -0.37
COPS7A-207ENST00000538375 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 SCRG1O75711 98 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 GUCA1CO95843 209 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 C1QAP02745 245 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 CXADRP78310 365 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 TLE3Q04726 772 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 SP140Q13342 867 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 NAB1Q13506 487 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 ZIC1Q15915 447 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 COL28A1Q2UY09 1125 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 UBAP2Q5T6F2 1119 aaKnown RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 CCDC81Q6ZN84 652 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 RELL1Q8IUW5 271 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 GPR135Q8IZ08 494 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 SPATA6LQ8N4H0 392 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 OR2L3Q8NG85 312 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 OR2A1Q8NGT9 310 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 OR8K5Q8NH50 307 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 OR1L3Q8NH93 324 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 HMGCLL1Q8TB92 370 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 CLIP3Q96DZ5 547 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 MED8Q96G25 268 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 CCNL2Q96S94 520 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 UNKQ9C0B0 810 aaKnown RBP12.71□□□□□ -0.37
COPS7A-207ENST00000538375 ATG10Q9H0Y0 220 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 TAC3Q9UHF0 121 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 PILRAQ9UKJ1 303 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.37
COPS7A-207ENST00000538375 ACACAQ13085 2346 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 E7ENX8 843 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 E7EQ34 232 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 CDC7O00311 574 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 PRICKLE3O43900 615 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 OR2B3O76000 313 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 TIAF1O95411 115 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 TSPAN12O95859 305 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 CCDC166P0CW27 439 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 PMS2P54278 862 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 ITGA1P56199 1179 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 RAB10P61026 200 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 YBX1P67809 324 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 TAP2Q03519 686 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 SRSF6Q13247 344 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 NAE1Q13564 534 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 PHKG1Q16816 387 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 MROH9Q5TGP6 573 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 PRAMEF17Q5VTA0 474 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 AGTRAPQ6RW13 159 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 MBOAT1Q6ZNC8 495 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 ADCK2Q7Z695 626 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 DTX1Q86Y01 620 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 MCATQ8IVS2 390 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 GSPT2Q8IYD1 628 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 ESX1Q8N693 406 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 ZUFSPQ96AP4 578 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 FCRL4Q96PJ5 515 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 GPR22Q99680 433 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 MCMBPQ9BTE3 642 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 DPH7Q9BTV6 452 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 SPRTNQ9H040 489 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 POPDC3Q9HBV1 291 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 CPNE5Q9HCH3 593 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 MRPS30Q9NP92 439 aaKnown RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 STOX2Q9P2F5 926 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 PLCL2Q9UPR0 1127 aa12.7□□□□□ -0.38
COPS7A-207ENST00000538375 TMEM184BQ9Y519 407 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-207ENST00000538375 A0A087WUV0 522 aaPredicted RBP12.69□□□□□ -0.38
COPS7A-207ENST00000538375 NPEPPSL1A6NEC2 478 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.69□□□□□ -0.38
COPS7A-207ENST00000538375 CCNDBP1O95273 360 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 FKBP9O95302 570 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 MT-ND3P03897 115 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 INHBAP08476 426 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 FAM153BP0C7A2 387 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 IMPA1P29218 277 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 MSH2P43246 934 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 UCNP55089 124 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 TMPRSS3P57727 454 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 BMPR2Q13873 1038 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 CSHL1Q14406 222 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 FAM153CQ494X1 144 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
COPS7A-207ENST00000538375 ARHGAP40Q5TG30 622 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 ICE2Q659A1 982 aa12.69□□□□□ -0.38
COPS7A-207ENST00000538375 FCRL6Q6DN72 434 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms