RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 PPP4R1Q8TF05 950 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 ZDHHC19Q8WVZ1 309 aaPredicted RBP16■□□□□ 0.15
PTPN6-210ENST00000538318 EIF2B3Q9NR50 452 aaKnown RBP16■□□□□ 0.15
PTPN6-210ENST00000538318 GNPTGQ9UJJ9 305 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 SLC5A6Q9Y289 635 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 NTNG1Q9Y2I2 539 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 MRFAP1Q9Y605 127 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 NFS1Q9Y697 457 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 CACNA1DQ01668 2161 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 VSTM2BA6NLU5 285 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 ALOX12BO75342 701 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 ZSCAN5DPP0CG00 497 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 RPL22P35268 128 aaKnown RBP15.99■□□□□ 0.15
PTPN6-210ENST00000538318 OR1D4P47884 311 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 SESN2P58004 480 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-210ENST00000538318 CCSMST1Q4G0I0 132 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 WASHC2DQ5SRD0 308 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 AGAP7PQ5VUJ5 663 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 OTOAQ7RTW8 1153 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 MAMDC2Q7Z304 686 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-210ENST00000538318 LRRC6Q86X45 466 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 RAB42Q8N4Z0 105 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 GSDMBQ8TAX9 411 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 AGAP4Q96P64 663 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 IL22Q9GZX6 179 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 SOX17Q9H6I2 414 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-210ENST00000538318 SEMA3GQ9NS98 782 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 CTSFQ9UBX1 484 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 TTC7AQ9ULT0 858 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-210ENST00000538318 CSAG2Q9Y5P2 127 aa15.99■□□□□ 0.15
PTPN6-210ENST00000538318 NDUFS3O75489 264 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 CLDN1O95832 211 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 PSMB5P28074 263 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 CCNFP41002 786 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 BDKRB1P46663 353 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 VSX2P58304 361 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 CRADDP78560 199 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 ELOAQ14241 798 aaKnown RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 SIX1Q15475 284 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 CCNG2Q16589 344 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 HIF1AQ16665 826 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 TUBB8Q3ZCM7 444 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 FRMPD2BQ6IN97 320 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 DRICH1Q6PGQ1 229 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 SHISA6Q6ZSJ9 500 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 DTWD1Q8N5C7 304 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 ST6GALNAC3Q8NDV1 305 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 OR2L3Q8NG85 312 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 OR11G2Q8NGC1 345 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 OR2A1Q8NGT9 310 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 COG1Q8WTW3 980 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 SKA2Q8WVK7 121 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 VPS50Q96JG6 964 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 C5orf34Q96MH7 638 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 BIRC8Q96P09 236 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 LHPPQ9H008 270 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 AGPAT4Q9NRZ5 378 aa15.98■□□□□ 0.15
PTPN6-210ENST00000538318 NOVA2Q9UNW9 492 aaKnown RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 DRG1Q9Y295 367 aaKnown RBP15.98■□□□□ 0.15
PTPN6-210ENST00000538318 A0A1W2PPV9 198 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 HYKKA2RU49 373 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 KRT87PA6NCN2 255 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 AP3B1O00203 1094 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 MED26O95402 600 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 NMBRP28336 390 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 TSFMP43897 325 aaKnown RBP15.97■□□□□ 0.15
PTPN6-210ENST00000538318 NPY2RP49146 381 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 RBBP7Q16576 425 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 CTSL3PQ5NE16 218 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 IRAK1BP1Q5VVH5 260 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 C4orf22Q6V702 233 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 PARP9Q8IXQ6 854 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 METTL27Q8N6F8 245 aaPredicted RBP15.97■□□□□ 0.15
PTPN6-210ENST00000538318 DNAJB14Q8TBM8 379 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 MAGEC3Q8TD91 643 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 FOPNLQ96NB1 174 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 MIPEPQ99797 713 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 ZNF304Q9HCX3 659 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 BFARQ9NZS9 450 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 SPATA7Q9P0W8 599 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 GUCA1BQ9UMX6 200 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 RUVBL2Q9Y230 463 aaKnown RBP15.97■□□□□ 0.15
PTPN6-210ENST00000538318 MAU2Q9Y6X3 613 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 FAM169AQ9Y6X4 670 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 MYO9AB2RTY4 2548 aa15.97■□□□□ 0.15
PTPN6-210ENST00000538318 CRYBG3Q68DQ2 2970 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 CELSR2Q9HCU4 2923 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 LOC105369274A0A096LPK9 316 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 LOC102723532A0A0G2JNH3 316 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 A0A0J9YVX5 310 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 NRP2O60462 931 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 MATN4O95460 622 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 ARNTP27540 789 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 COL8A1P27658 744 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 CARSP49589 748 aaKnown RBP15.96■□□□□ 0.15
PTPN6-210ENST00000538318 EIF3BP55884 814 aaKnown RBP15.96■□□□□ 0.15
PTPN6-210ENST00000538318 KLC1Q07866 573 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 Q0VFX4 171 aa15.96■□□□□ 0.15
PTPN6-210ENST00000538318 GBX1Q14549 363 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms