RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ADCY4Q8NFM4 1077 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 SLC9A6Q92581 669 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ZDHHC12Q96GR4 267 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 F2RL3Q96RI0 385 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 EHD1Q9H4M9 534 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CACYBPQ9HB71 228 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 CCDC167Q9P0B6 97 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 OR10H1Q9Y4A9 318 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 SPACA6W5XKT8 324 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PKD1L2Q7Z442 2459 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 USF3Q68DE3 2245 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 LOC285095A0A1B0GVY8 99 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 MASP2O00187 686 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ARNTLO00327 626 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KPNA5O15131 536 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KRT6AP02538 564 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KRT6BP04259 564 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 FEN1P39748 380 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 SERPINB4P48594 390 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KRT6CP48668 564 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CCL11P51671 97 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TBPL1P62380 186 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 LINC00696Q6ZRV3 163 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PLXDC1Q8IUK5 500 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 FAM47BQ8NA70 645 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CEP76Q8TAP6 659 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 RBBP8Q99708 897 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 NLNQ9BYT8 704 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 NSRP1Q9H0G5 558 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 APMAPQ9HDC9 416 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KLHL1Q9NR64 748 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 DNAJC11Q9NVH1 559 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TMEM51Q9NW97 253 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 MKL2Q9ULH7 1088 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 SNX7Q9UNH6 387 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ERVK-11Q9UQG0 969 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TEX264Q9Y6I9 313 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 MGAQ8IWI9 3026 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TRABD2BA6NFA1 517 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 QSOX1O00391 747 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TRAFD1O14545 582 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 HTRA2O43464 458 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 TRIM13O60858 407 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ENO3P13929 434 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 GNAZP19086 355 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 RPL26P61254 145 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 RPS18P62269 152 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 RALGDSQ12967 914 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 SYT16Q17RD7 645 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 NLGN4YQ8NFZ3 816 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 C8orf44Q96CB5 159 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 LRRC39Q96DD0 335 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PTCHD1Q96NR3 888 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ZBTB18Q99592 522 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 AIF1LQ9BQI0 150 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TBCDQ9BTW9 1192 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CAPS2Q9BXY5 557 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ARMCX1Q9P291 453 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 RNF11Q9Y3C5 154 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PTRH2Q9Y3E5 179 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 ZCWPW2A0A1B0GU75 182 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ARHGEF33A8MVX0 844 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 K7ESF4 209 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CPNE6O95741 557 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 EFEMP2O95967 443 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 AQP1P29972 269 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 LIMK2P53671 638 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 GABREP78334 506 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 NHLH1Q02575 133 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 RGS1Q08116 209 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 TGFBIQ15582 683 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ATG16L1Q676U5 607 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 LRRC8EQ6NSJ5 796 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 MACC1Q6ZN28 852 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 DCUN1D3Q8IWE4 304 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KRT78Q8N1N4 520 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 OR9A1PQ8NGU1 263 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 RBM18Q96H35 190 aaKnown RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 ATP6V1G3Q96LB4 118 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 KIFC1Q9BW19 673 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 SCNM1Q9BWG6 230 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.01□□□□□ -1.292e-10■■■□□ 19.2
MSH6-209ENST00000538136 FBRSQ9HAH7 460 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 PNPOQ9NVS9 261 aa7.01□□□□□ -1.29
MSH6-209ENST00000538136 ZNF490Q9ULM2 529 aaPredicted RBP7.01□□□□□ -1.29
MSH6-209ENST00000538136 HECTD1Q9ULT8 2610 aa7□□□□□ -1.29
MSH6-209ENST00000538136 SGK494L7N484 410 aa7□□□□□ -1.29
MSH6-209ENST00000538136 EIF2S3P41091 472 aaKnown RBP7□□□□□ -1.29
MSH6-209ENST00000538136 GSCP56915 257 aaPredicted RBP7□□□□□ -1.29
MSH6-209ENST00000538136 HSPB3Q12988 150 aa7□□□□□ -1.29
MSH6-209ENST00000538136 PYCR3Q53H96 274 aa7□□□□□ -1.29
MSH6-209ENST00000538136 FIGLAQ6QHK4 219 aa7□□□□□ -1.29
MSH6-209ENST00000538136 ZNF621Q6ZSS3 439 aa7□□□□□ -1.29
MSH6-209ENST00000538136 OR52B6Q8NGF0 335 aa7□□□□□ -1.29
MSH6-209ENST00000538136 OR8K5Q8NH50 307 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms