RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ZNF480Q8WV37 535 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 CLIP3Q96DZ5 547 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SYNPO2LQ9H987 977 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SLC6A20Q9NP91 592 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 STARD5Q9NSY2 213 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 TAS2R13Q9NYV9 303 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 ZFATQ9P243 1243 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SERTAD3Q9UJW9 196 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 IKZF3Q9UKT9 509 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 UTP11Q9Y3A2 253 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 MRFAP1Q9Y605 127 aa12.65□□□□□ -0.38
PRKDC-206ENST00000536429 SNRNP200O75643 2136 aaKnown RBP12.65□□□□□ -0.38
PRKDC-206ENST00000536429 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 E7ENX8 843 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 OR2B3O76000 313 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 C1QAP02745 245 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 ITGB2P05107 769 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 CAPN1P07384 714 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 FAM87AP0C7U9 286 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 IMPA1P29218 277 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 SKIV2L2P42285 1042 aaKnown RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 GPX6P59796 221 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 TAP2Q03519 686 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 TSTA3Q13630 321 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 WHAMMP3Q1A5X7 153 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 C1orf189Q5VU69 101 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 ZNF385CQ66K41 422 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 FAM198BQ6UWH4 519 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 ZC3HC1Q86WB0 502 aaKnown RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 TMEM151BQ8IW70 566 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 SYTL1Q8IYJ3 562 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 RAB42Q8N4Z0 105 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 FBXO15Q8NCQ5 510 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 PYROXD1Q8WU10 500 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 N4BP2L2Q92802 583 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 MCMBPQ9BTE3 642 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 EFHD1Q9BUP0 239 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 ACTL8Q9H568 366 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 DHCR7Q9UBM7 475 aaKnown RBP12.64□□□□□ -0.39
PRKDC-206ENST00000536429 PLCL2Q9UPR0 1127 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 PDE10AQ9Y233 779 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 VWA7Q9Y334 891 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 PCDHGA6Q9Y5G7 932 aa12.64□□□□□ -0.39
PRKDC-206ENST00000536429 SEC16AO15027 2179 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 C21orf140B9A014 251 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 NDC80O14777 642 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 EIF3HO15372 352 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 ZSCAN9O15535 394 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 SAT1P21673 171 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 GCGRP47871 477 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 FOXL2P58012 376 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 IL10RAQ13651 578 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 ARHGAP19Q14CB8 494 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 PHKG1Q16816 387 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 FAM45BPQ6NSW5 357 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 CCDC25Q86WR0 208 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 GPR135Q8IZ08 494 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 FAM45AQ8TCE6 357 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 SMPDL3AQ92484 453 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 WBP1Q96G27 269 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 ABCF3Q9NUQ8 709 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 IRAK4Q9NWZ3 460 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 TAC3Q9UHF0 121 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 KCND3Q9UK17 655 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 FARSAQ9Y285 508 aaKnown RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 KLK4Q9Y5K2 254 aa12.63□□□□□ -0.39
PRKDC-206ENST00000536429 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
PRKDC-206ENST00000536429 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 LOC102723532A0A0G2JNH3 316 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 A0A0J9YVX5 310 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 FAM95CA0A1B0GW59 222 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 TCRBV9S1A1TA0A576 114 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 CDC14CA4D256 554 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 OR2A25A4D2G3 310 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ZBTB14O43829 449 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 CREG1O75629 220 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 MED26O95402 600 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 KLK3P07288 261 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 ITGAXP20702 1163 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 PTPN4P29074 926 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 RPA3P35244 121 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-206ENST00000536429 RGS4P49798 205 aa12.62□□□□□ -0.39
PRKDC-206ENST00000536429 TAS2R39P59534 338 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms