RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 FRA10AC1Q70Z53 315 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 AENQ8WTP8 325 aaKnown RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 DCAKDQ8WVC6 231 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ATL1Q8WXF7 558 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PITPNM3Q9BZ71 974 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 INTS7Q9NVH2 962 aaKnown RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 SOHLH2Q9NX45 425 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ARL15Q9NXU5 204 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PSMC3IPQ9P2W1 217 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ADAMTS6Q9UKP5 1117 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ACOT9Q9Y305 439 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 A0A0J9YY10 115 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 IQANK1A0A1B0GTG1 560 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 HAX1O00165 279 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 STK17BO94768 372 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SNRPAP09012 282 aaKnown RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 LTA4HP09960 611 aaKnown RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 VAC14Q08AM6 782 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 TUBB3Q13509 450 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CSHL1Q14406 222 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 KCNAB1Q14722 419 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SF1Q15637 639 aaKnown RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 FAM83EQ2M2I3 478 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 MANEAQ5SRI9 462 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CCDC81Q6ZN84 652 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 VASH2Q86V25 355 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 C2orf73Q8N5S3 287 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 DENND1AQ8TEH3 1009 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SNRNP27Q8WVK2 155 aaKnown RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 ANKRD49Q8WVL7 239 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 DLG3Q92796 817 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CAVIN3Q969G5 261 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 NKD1Q969G9 470 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 UBXN10Q96LJ8 280 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 PPM1MQ96MI6 270 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 OR2A14Q96R47 310 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 DHRS4Q9BTZ2 278 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SPRY4Q9C004 299 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 TWSG1Q9GZX9 223 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 NMRAL1Q9HBL8 299 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 BTRCQ9Y297 605 aa13.05□□□□□ -0.32
RPAIN-205ENST00000536255 TMEM184BQ9Y519 407 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-205ENST00000536255 FAM208BQ5VWN6 2430 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 A0A096LPK6 155 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 HMX2A2RU54 273 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 NPEPPSL1A6NEC2 478 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 K7ENP7 123 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 RAD1O60671 282 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 CCNDBP1O95273 360 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 ALDOAP04075 364 aaKnown RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 C2P06681 752 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 EBLN1P0CF75 366 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 FGF5P12034 268 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 FOLR1P15328 257 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 CD1DP15813 335 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 CCND1P24385 295 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 HSD17B3P37058 310 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 CDKL1Q00532 357 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 ACY1Q03154 408 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 PHKG1Q16816 387 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 ARHGAP40Q5TG30 622 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 KLC3Q6P597 504 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 INO80CQ6PI98 192 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 SBSNQ6UWP8 590 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 BPHLQ86WA6 291 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 PPP1R3BQ86XI6 285 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 NLGN4XQ8N0W4 816 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 D2HGDHQ8N465 521 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 LMNTD1Q8N9Z9 388 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 NLGN4YQ8NFZ3 816 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-205ENST00000536255 ISL2Q96A47 359 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 CABS1Q96KC9 395 aa13.04□□□□□ -0.32
RPAIN-205ENST00000536255 TSNARE1Q96NA8 513 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms