RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GABRQQ9UN88 632 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 HEMK1Q9Y5R4 338 aaPredicted RBP6.46□□□□□ -1.38
USP28-202ENST00000535607 A3GALT2U3KPV4 340 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PTPRJQ12913 1337 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 COL1A2P08123 1366 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 DOCK3Q8IZD9 2030 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CENPFP49454 3210 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 WDR81Q562E7 1941 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 A0A1W2PR48 441 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 EI24O14681 340 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RAD51BO15315 384 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 INPP4BO15327 924 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SYNCRIPO60506 623 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 BCAS1O75363 584 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 RFPL2O75678 378 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 NADKO95544 446 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 TOP3BO95985 862 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 AMHP03971 560 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CHRNGP07510 517 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MMP3P08254 477 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CCDC159P0C7I6 412 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 VSIG10L2P0DP72 767 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CDH1P12830 882 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MATN1P21941 496 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 IL4RP24394 825 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 ARRB2P32121 409 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 ARL2P36404 184 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SLC26A3P40879 764 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 DPP6P42658 865 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 NDST1P52848 882 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 PLA2G16P53816 162 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 KCNK10P57789 538 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 GNG2P59768 71 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MRPS15P82914 257 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 SP2Q02086 613 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CDH17Q12864 832 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SLC10A2Q12908 348 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 RALGDSQ12967 914 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 DAG1Q14118 895 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 POLD3Q15054 466 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 TAF5Q15542 800 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CCL14Q16627 93 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 HIST2H2ACQ16777 129 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 LY6KQ17RY6 165 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 TIGD2Q4W5G0 525 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CYBRD1Q53TN4 286 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 C6orf183Q5T699 404 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SYCE2Q6PIF2 218 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SCARA5Q6ZMJ2 495 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 FAM183BPQ6ZVS7 135 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 STRADAQ7RTN6 431 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 PID1Q7Z2X4 250 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CMC1Q7Z7K0 106 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CCDC117Q8IWD4 279 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 KIAA0319LQ8IZA0 1049 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 LGI2Q8N0V4 545 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 FSTL5Q8N475 847 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 KDM1BQ8NB78 822 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CCNYQ8ND76 341 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 FAM156AQ8NDB6 213 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 BPIFB6Q8NFQ5 453 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 OR6J1Q8NGC5 347 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 OR5M3Q8NGP4 307 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 OR6Q1Q8NGQ2 317 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SUN5Q8TC36 379 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 FCGR1BQ92637 280 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MUL1Q969V5 352 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RMDN1Q96DB5 314 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RPL10LQ96L21 214 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 C8orf48Q96LL4 319 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 PPP1R36Q96LQ0 422 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 NODALQ96S42 347 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 APOL4Q9BPW4 351 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RBM4BQ9BQ04 359 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 C17orf80Q9BSJ5 609 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RBM4Q9BWF3 364 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 FUNDC2Q9BWH2 189 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 HOXD1Q9GZZ0 328 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 LHPPQ9H008 270 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MMP27Q9H306 513 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 SLA2Q9H6Q3 261 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 MARCH7Q9H992 704 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CASS4Q9NQ75 786 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 ZNF302Q9NR11 478 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 PAK1IP1Q9NWT1 392 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 COMMD8Q9NX08 183 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 USE1Q9NZ43 259 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 STMN3Q9NZ72 180 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 RAPGEFL1Q9UHV5 662 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 ZNF639Q9UID6 485 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 TUBD1Q9UJT1 453 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 C3orf18Q9UK00 162 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 ZNF221Q9UK13 617 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 CPSF3Q9UKF6 684 aaKnown RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 MAGED2Q9UNF1 606 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 CAB39Q9Y376 341 aaPredicted RBP6.45□□□□□ -1.38
USP28-202ENST00000535607 GRIP1Q9Y3R0 1128 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 PCDHGB1Q9Y5G3 927 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 HSPE1-MOB4S4R3N1 261 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms