RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 FAM83EQ2M2I3 478 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 FRA10AC1Q70Z53 315 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 CARFQ8N187 725 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 OR2L3Q8NG85 312 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 OR56A3Q8NH54 315 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 EXT2Q93063 718 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 SLC22A18Q96BI1 424 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.38
TMEM258-202ENST00000535042 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 PYCR2Q96C36 320 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 RHBDF1Q96CC6 855 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 SGPP1Q9BX95 441 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
TMEM258-202ENST00000535042 ROPN1BQ9BZX4 212 aaPredicted RBP12.65□□□□□ -0.38
TMEM258-202ENST00000535042 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 ROPN1Q9HAT0 212 aaPredicted RBP12.65□□□□□ -0.38
TMEM258-202ENST00000535042 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 SLC6A20Q9NP91 592 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 PISDQ9UG56 409 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 TAC3Q9UHF0 121 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 RNF112Q9ULX5 631 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 BTRCQ9Y297 605 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 PCDHB11Q9Y5F2 797 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 PCDHGA8Q9Y5G5 932 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 SPEGQ15772 3267 aa12.65□□□□□ -0.38
TMEM258-202ENST00000535042 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 ZNF839A8K0R7 811 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 UBXN8O00124 270 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 HCRTR1O43613 425 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 NRP2O60462 931 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 KERAO60938 352 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 ERLIN1O75477 346 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 TNFSF15O95150 251 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 MT-ND3P03897 115 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 ANXA5P08758 320 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 EBLN1P0CF75 366 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 PYGBP11216 843 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 COL6A2P12110 1019 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 RPA3P35244 121 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 GRIA3P42263 894 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 GDF5P43026 501 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 HSD11B2P80365 405 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 MC2RQ01718 297 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 PTCHD3Q3KNS1 767 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 TECRLQ5HYJ1 363 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 FCRL6Q6DN72 434 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 FAM129CQ86XR2 697 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 KMT5CQ86Y97 462 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 TMEM151AQ8N4L1 468 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 C19orf47Q8N9M1 422 aaKnown RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 RHEBL1Q8TAI7 183 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 GATA6Q92908 595 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 ESAMQ96AP7 390 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 MED8Q96G25 268 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 CABS1Q96KC9 395 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 OR4K3Q96R72 315 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 EGFL8Q99944 293 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 TMEM79Q9BSE2 394 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 APMAPQ9HDC9 416 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 CCDC177Q9NQR7 707 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 AKAP7Q9P0M2 348 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-202ENST00000535042 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 LGALS13Q9UHV8 139 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 NCOR2Q9Y618 2525 aa12.64□□□□□ -0.39
TMEM258-202ENST00000535042 PABPN1LA6NDY0 278 aaKnown RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 B4E171 279 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SUPT3HO75486 399 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SBK3P0C264 359 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 JMJD7P0C870 316 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 NPPBP16860 134 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 KRT15P19012 456 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 TSPAN7P41732 249 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SLC6A12P48065 614 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 GABRA4P48169 554 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ARL4DP49703 201 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 MAPK10P53779 464 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 PRDX1Q06830 199 aaKnown RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 THEMIS2Q5TEJ8 643 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 PRAMEF13Q5VWM6 474 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ICE2Q659A1 982 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CAPN13Q6MZZ7 669 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 C16orf46Q6P387 395 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CDHR3Q6ZTQ4 885 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 RIBC1Q8N443 379 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 PDPRQ8NCN5 879 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ATL1Q8WXF7 558 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 USP7Q93009 1102 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms