RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TBCCD1Q9NVR7 557 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ZNF358Q9NW07 568 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TMEM216Q9P0N5 145 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 NEMP2A6NFY4 417 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 CDC7O00311 574 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 BTN3A1O00481 513 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SNX2O60749 519 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 EML2O95834 649 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TOP3BO95985 862 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ANXA6P08133 673 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ENO2P09104 434 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ZNF883P0CG24 379 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SMIM18P0DKX4 95 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SLC2A4P14672 509 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ENGP17813 658 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TFEBP19484 476 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 GRK2P25098 689 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 RPL10P27635 214 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 RAB15P59190 212 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 BNIP3Q12983 259 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 CLCA4Q14CN2 919 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 RPE65Q16518 533 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TECRLQ5HYJ1 363 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 OGFOD3Q6PK18 319 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ADAMTSL2Q86TH1 951 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SLC25A45Q8N413 288 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TMEM151AQ8N4L1 468 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 FAM46DQ8NEK8 389 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 STAG3L4Q8TBR4 150 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SAP25Q8TEE9 199 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 MPP4Q96JB8 637 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 RDH14Q9HBH5 336 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 UCKL1Q9NWZ5 548 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 EMCNQ9ULC0 261 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PSMD13Q9UNM6 376 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 DTNAQ9Y4J8 743 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 HEBP2Q9Y5Z4 205 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 CABIN1Q9Y6J0 2220 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 OTOGLQ3ZCN5 2332 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 KIR2DS5A0A0G2JLQ3 304 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 A0A0G2JNG1 304 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 TARM1B6A8C7 271 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 KIR2DS3K7RE56 304 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 PCDHGA12O60330 932 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 KERAO60938 352 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 COQ9O75208 318 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 CLPTM1O96005 669 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 CATP04040 527 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 RPN2P04844 631 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 GIMD1P0DJR0 217 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 MTHFD1P11586 935 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 XRCC1P18887 633 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 CCT8P50990 548 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 TUBB3Q13509 450 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 KIR2DS5Q14953 304 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 OR4D1Q15615 310 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 TSNQ15631 228 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 PPP1R3AQ16821 1122 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 CCDC153Q494R4 210 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 N4BP2L1Q5TBK1 243 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 SBSNQ6UWP8 590 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 UBE2R2Q712K3 238 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 C17orf82Q86X59 251 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 TBC1D21Q8IYX1 336 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 FBXO27Q8NI29 283 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 PIWIL2Q8TC59 973 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 SKA2Q8WVK7 121 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 DLG3Q92796 817 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 C12orf66Q96MD2 445 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 ATOH8Q96SQ7 321 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 MRPL46Q9H2W6 279 aaKnown RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 SMOC1Q9H4F8 434 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 MVB12BQ9H7P6 319 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 PARVBQ9HBI1 364 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 FAM86C1Q9NVL1 165 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 ADAMTS6Q9UKP5 1117 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 TP53BP1Q12888 1972 aaPredicted RBP11.94□□□□□ -0.5
SCARB1-204ENST00000535005 WDR87Q6ZQQ6 2873 aa11.94□□□□□ -0.5
SCARB1-204ENST00000535005 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 H0YJX3 145 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SLC22A2O15244 555 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PLIN3O60664 434 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SDC3O75056 442 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 C1orf105O95561 183 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PROCP04070 461 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SBK3P0C264 359 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 NDUFS1P28331 727 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 KCNC1P48547 511 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 AQP4P55087 323 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 FOLH1Q04609 750 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 DCTN2Q13561 401 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TCEA2Q15560 299 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TRIP10Q15642 601 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms