RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 RAP2AP10114 183 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 HEPACAMQ14CZ8 416 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 CLLU1OSQ5K130 101 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TMEM214Q6NUQ4 689 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 PTCHD4Q6ZW05 846 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 LCN9Q8WX39 176 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 KCNA7Q96RP8 456 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TUBGCP5Q96RT8 1024 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 CRISPLD1Q9H336 500 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 NSUN3Q9H649 340 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 DNAAF2Q9NVR5 837 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 AKAP7Q9P0M2 348 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 VPS29Q9UBQ0 182 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 PRPS1L1P21108 318 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TAS2R41P59536 307 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TECRLQ5HYJ1 363 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TREML1Q86YW5 311 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 FAM20CQ8IXL6 584 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 C12orf66Q96MD2 445 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 ADI1Q9BV57 179 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 SLC29A3Q9BZD2 475 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 WDR6Q9NNW5 1121 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TRPV5Q9NQA5 729 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 ITM2CQ9NQX7 267 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 MTRRQ9UBK8 725 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 MRPS33Q9Y291 106 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 C2orf78A6NCI8 922 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 FRG2Q64ET8 278 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 FAM131AQ6UXB0 335 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 CEP97Q8IW35 865 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 SVOPLQ8N434 492 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 TEX47Q8TBZ9 253 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 KLK6Q92876 244 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 FRG2BQ96QU4 278 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.28
PHRF1-206ENST00000534320 OSER1Q9NX31 292 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
PHRF1-206ENST00000534320 A0A0X1KG70 313 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 LOC730098B7Z3J9 87 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 S1PR4O95977 384 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 CTSKP43235 329 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ILF3Q12906 894 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■■□□□ 14.5
PHRF1-206ENST00000534320 PPP2R2DQ66LE6 453 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ZC3H10Q96K80 434 aaKnown RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 MAGEE1Q9HCI5 957 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 GPN1Q9HCN4 374 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 PTGFRNQ9P2B2 879 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 B4GALT6Q9UBX8 382 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.82■□□□□ 0.283e-8■■■■■ 33.2
PHRF1-206ENST00000534320 LRRC72A6NJI9 287 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 PSMD11O00231 422 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ERN1O75460 977 aaKnown RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 BMP7P18075 431 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 IL4RP24394 825 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 NXPE1Q8N323 547 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 C3orf58Q8NDZ4 430 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 CGREF1Q99674 301 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 RASSF1Q9NS23 344 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 NOTOA8MTQ0 251 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 PCDH7O60245 1069 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 IFNW1P05000 195 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 RAB2AP61019 212 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 CREB5Q02930 508 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 TEAD4Q15561 434 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ZNF598Q86UK7 904 aaKnown RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 PARGQ86W56 976 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 MINDY2Q8NBR6 621 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 EFCAB11Q9BUY7 163 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 OR1I1O60431 355 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 SYN1P17600 705 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 CD68P34810 354 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-206ENST00000534320 MTAPQ13126 283 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 SCD5Q86SK9 330 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ZDHHC21Q8IVQ6 265 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 CANT1Q8WVQ1 401 aa16.82■□□□□ 0.28
PHRF1-206ENST00000534320 ENO2P09104 434 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-206ENST00000534320 DGKQP52824 942 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 TPTEP56180 551 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 UFM1P61960 85 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 GPRC6AQ5T6X5 926 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 TTC9BQ8N6N2 239 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 BPIFB1Q8TDL5 484 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 POF1BQ8WVV4 589 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 CCDC115Q96NT0 180 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 CCDC106Q9BWC9 280 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 EDDM13A0A1B0GTR0 161 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 hCG_2039718K7EN88 272 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 ARPC2O15144 300 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 MYCLP1P12525 358 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-206ENST00000534320 CD1DP15813 335 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 HSPB3Q12988 150 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 ZNF282Q9UDV7 671 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-206ENST00000534320 SCAMP1O15126 338 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 ZBTB11O95625 1053 aaPredicted RBP16.81■□□□□ 0.28
PHRF1-206ENST00000534320 CSF2RAP15509 400 aa16.81■□□□□ 0.28
PHRF1-206ENST00000534320 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms