RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CHORDC1Q9UHD1 332 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-205ENST00000533776 MTUS1Q9ULD2 1270 aa2.38□□□□□ -2.03
BRCA2-205ENST00000533776 GRID1Q9ULK0 1009 aa2.38□□□□□ -2.03
BRCA2-205ENST00000533776 GRIP1Q9Y3R0 1128 aa2.38□□□□□ -2.03
BRCA2-205ENST00000533776 SRRM5B3KS81 715 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 TSPAN1O60635 241 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 PGM3O95394 542 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 HPRP00739 348 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 OR2T7P0C7T2 308 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 PTPN3P26045 913 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 CASP2P42575 452 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 HERV-K104P61576 105 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 CYCSP99999 105 aaKnown RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 NR1D2Q14995 579 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 C15orf59Q2T9L4 293 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 RNF212Q495C1 297 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 BMP2KLQ5H9B9 411 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 SLC25A53Q5H9E4 307 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 RNASEH2BQ5TBB1 312 aaKnown RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 SEL1L3Q68CR1 1132 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 CFAP161Q6P656 301 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 TMEM207Q6UWW9 146 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 SLC47A2Q86VL8 602 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 DNAAF5Q86Y56 855 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 TMEM139Q8IV31 216 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 ZNF595Q8IYB9 648 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 MINDY1Q8N5J2 469 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 OR6S1Q8NH40 331 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 MOSPD2Q8NHP6 518 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 ATP8B4Q8TF62 1192 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 IRGQQ8WZA9 623 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 ZNF622Q969S3 477 aaKnown RBP eCLIP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 NXNL1Q96CM4 212 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 TMCO6Q96DC7 493 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 MS4A10Q96PG2 267 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 GCNAQ96QF7 691 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 BTBD10Q9BSF8 475 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 KLHL4Q9C0H6 718 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 GOLPH3LQ9H4A5 285 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 OPA3Q9H6K4 179 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 CHST11Q9NPF2 352 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 FGF21Q9NSA1 209 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 CPSF2Q9P2I0 782 aaKnown RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 B3GAT1Q9P2W7 334 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 PPIEQ9UNP9 301 aaKnown RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 PPP2R2CQ9Y2T4 447 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 WBP11Q9Y2W2 641 aaKnown RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 MAGED1Q9Y5V3 778 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-205ENST00000533776 SNX8Q9Y5X2 465 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 ZNF541Q9H0D2 1346 aa2.37□□□□□ -2.03
BRCA2-205ENST00000533776 FEZF1A0PJY2 475 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 ANKRD61A6NGH8 418 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 ACOD1A6NK06 481 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 GLOD5A6NK44 160 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 MPTX1A8MV57 137 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 IPO8O15397 1037 aaKnown RBP2.36□□□□□ -2.03
BRCA2-205ENST00000533776 ADAM20O43506 726 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 OR10H2O60403 315 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 TOMM70O94826 608 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 STARD3NLO95772 234 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 WDPCPO95876 746 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 JAK1P23458 1154 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 NNMTP40261 264 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 SLC9A3P48764 834 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 TMEM50BP56557 158 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 ZFP36L1Q07352 338 aaKnown RBP2.36□□□□□ -2.03
BRCA2-205ENST00000533776 LY6DQ14210 128 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 SNAPC1Q16533 368 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 HIGD2BQ4VC39 106 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 C20orf194Q5TEA3 1177 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 C6orf163Q5TEZ5 329 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 WDR78Q5VTH9 848 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 LYSMD4Q5XG99 296 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 CDK20Q8IZL9 346 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 EXD1Q8NHP7 514 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 PHLDA1Q8WV24 401 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-205ENST00000533776 NECTIN4Q96NY8 510 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 EQTNQ9NQ60 294 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 MAN2C1Q9NTJ4 1040 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 P4HTMQ9NXG6 502 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 CRNNQ9UBG3 495 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-205ENST00000533776 PRO0461Q9UI25 63 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 DAPK2Q9UIK4 370 aa2.36□□□□□ -2.03
BRCA2-205ENST00000533776 MYH14Q7Z406 1995 aaKnown RBP2.36□□□□□ -2.03
BRCA2-205ENST00000533776 hCG_1809904A0A1W2PP81 198 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 A0A1W2PPE2 198 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 A0A1W2PR64 198 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 A0A1W2PR80 420 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 ASB14A6NK59 587 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 ERAL1O75616 437 aaKnown RBP2.35□□□□□ -2.03
BRCA2-205ENST00000533776 SMIM18P0DKX4 95 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 HSPA8P11142 646 aaKnown RBP2.35□□□□□ -2.03
BRCA2-205ENST00000533776 SLC6A6P31641 620 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 RPL21P46778 160 aaKnown RBP2.35□□□□□ -2.03
BRCA2-205ENST00000533776 LMAN1P49257 510 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 LIG4P49917 911 aa2.35□□□□□ -2.03
BRCA2-205ENST00000533776 TRA2BP62995 288 aaKnown RBP2.35□□□□□ -2.03
BRCA2-205ENST00000533776 IFI35P80217 286 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-205ENST00000533776 ZNF415Q09FC8 603 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms