RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LRRTM4Q86VH4 590 aa17.14■□□□□ 0.33
PHRF1-205ENST00000533464 POPDC3Q9HBV1 291 aa17.14■□□□□ 0.33
PHRF1-205ENST00000533464 ZDHHC4Q9NPG8 344 aa17.14■□□□□ 0.33
PHRF1-205ENST00000533464 PGLSO95336 258 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 ZNF24P17028 368 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 SYN1P17600 705 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 ALDH4A1P30038 563 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 GHRHRQ02643 423 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 EMX2Q04743 252 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CEP97Q8IW35 865 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 PEX5LQ8IYB4 626 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CAPSLQ8WWF8 208 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TFGQ92734 400 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-205ENST00000533464 ADAP2Q9NPF8 381 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 PPIEQ9UNP9 301 aaKnown RBP17.13■□□□□ 0.33
PHRF1-205ENST00000533464 NUP98P52948 1817 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 PSMD4P55036 377 aaKnown RBP17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■□ 21.6
PHRF1-205ENST00000533464 CCNIQ14094 377 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 FAAH2Q6GMR7 532 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 FAM180AQ6UWF9 173 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 COX4I2Q96KJ9 171 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TXLNGYQ9BZA5 131 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 EVA1BQ9NVM1 165 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 ANXA8P13928 327 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
PHRF1-205ENST00000533464 RPS6KA3P51812 740 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CRISP3P54108 245 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TECRLQ5HYJ1 363 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 OGFOD2Q6N063 350 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 SAMD14Q8IZD0 417 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CNPPD1Q9BV87 410 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CD244Q9BZW8 370 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 TVP23BQ9NYZ1 205 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 PTTG2Q9NZH5 202 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 NFATC2Q13469 925 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■□ 22.9
PHRF1-205ENST00000533464 ENPP7Q6UWV6 458 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 COL21A1Q96P44 957 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 ABCB9Q9NP78 766 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 MKS1Q9NXB0 559 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 DHRS7Q9Y394 339 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 HEBP2Q9Y5Z4 205 aa17.13■□□□□ 0.33
PHRF1-205ENST00000533464 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 SDHDO14521 159 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 S1PR4O95977 384 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CLCN4P51793 760 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TRIM32Q13049 653 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 DSC3Q14574 896 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 UBAP2Q5T6F2 1119 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TMC8Q8IU68 726 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 PACRGLQ8N7B6 248 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 HTRA1Q92743 480 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 POLR2J3Q9H1A7 115 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 MAP10Q9P2G4 905 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 OAS3Q9Y6K5 1087 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 EDN1P05305 212 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TFPIP10646 304 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 FMO3P31513 532 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 AKT2P31751 481 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 OXR1Q8N573 874 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 OR10G2Q8NGC3 310 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 PEX13Q92968 403 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TLR9Q9NR96 1032 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 MARCH4Q9P2E8 410 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 IKZF2Q9UKS7 526 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TMED5Q9Y3A6 229 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 PRRC2BQ5JSZ5 2229 aaKnown RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 ZNF840PA6NDX5 716 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 B3GALT2O43825 422 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 GMFGO60234 142 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 KHKP50053 298 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 STEAP4Q687X5 459 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 KRT74Q7RTS7 529 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 LAPTM4BQ86VI4 370 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 RANBP3LQ86VV4 465 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-205ENST00000533464 COX18Q8N8Q8 333 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TMEM145Q8NBT3 493 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 TRIM63Q969Q1 353 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 YIPF4Q9BSR8 244 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CCDC106Q9BWC9 280 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 SPATA7Q9P0W8 599 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 LAMB4A4D0S4 1761 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 RIIAD1A6NNX1 92 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CHST10O43529 356 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 CD1DP15813 335 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 PREPP48147 710 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 EGFLAMQ63HQ2 1017 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 PRR23BQ6ZRT6 265 aa17.12■□□□□ 0.33
PHRF1-205ENST00000533464 OAFQ86UD1 273 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms