RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ZBTB14O43829 449 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 RECKO95980 971 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 SNRPAP09012 282 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 EBLN1P0CF75 366 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TPBGLP0DKB5 382 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF37AP17032 561 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF28P17035 718 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 CDH3P22223 829 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TYK2P29597 1187 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 KIAA1614Q5VZ46 1190 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 UBE2R2Q712K3 238 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 CMC1Q7Z7K0 106 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 RASGRP3Q8IV61 690 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 RAB42Q8N4Z0 105 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 MYRIPQ8NFW9 859 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF501Q96CX3 271 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 VPS11Q9H270 941 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 XKR8Q9H6D3 395 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 GPN2Q9H9Y4 310 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 SNX15Q9NRS6 342 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 PSMC3IPQ9P2W1 217 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TBK1Q9UHD2 729 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF180Q9UJW8 692 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 ICKQ9UPZ9 632 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 IQANK1A0A1B0GTG1 560 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PIPSLA2A3N6 862 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 GSAPA4D1B5 854 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 SLC9B1P1A6NJY1 282 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 MAP3K7O43318 606 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 KIAA0754O94854 1291 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 MATN4O95460 622 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 C1orf105O95561 183 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 CYP2A7P20853 494 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 MC1RQ01726 317 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TSTA3Q13630 321 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 CSHL1Q14406 222 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 KCNAB1Q14722 419 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 KIR2DS3Q14952 304 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PWWP2BQ6NUJ5 590 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 SPESP1Q6UW49 350 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TMEM207Q6UWW9 146 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 SPATA6LQ8N4H0 392 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 MCOLN3Q8TDD5 553 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 ASB11Q8WXH4 323 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PPM1MQ96MI6 270 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 LRFN5Q96NI6 719 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 CATSPER2Q96P56 530 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TRAPPC9Q96Q05 1148 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 UNKQ9C0B0 810 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 ACTR10Q9NZ32 417 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PADI1Q9ULC6 663 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PLAAQ9Y263 795 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 SMG1Q96Q15 3661 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-212ENST00000533058 A0A087X1B8 175 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 CCDC151A5D8V7 595 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 NPEPPSL1A6NEC2 478 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 RASGRF2O14827 1237 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 PSIP1O75475 530 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 C8GP07360 202 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 CHRM5P08912 532 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 HIST1H2AGP0C0S8 130 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 CCNYL3P0C7X3 344 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 HIST1H2ADP20671 130 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 RAB28P51157 221 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 GRB7Q14451 532 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZKSCAN8Q15776 578 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 LINC00303Q3SY05 128 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 ADGRD1Q6QNK2 874 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 CYHR1Q6ZMK1 362 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 ZNF517Q6ZMY9 492 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 MREGQ8N565 214 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 GALNT6Q8NCL4 622 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 FLVCR1-AS1Q8TAF5 88 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 EPS8L3Q8TE67 593 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 ANKRD49Q8WVL7 239 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 SLC22A18Q96BI1 424 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 MTBPQ96DY7 904 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 MED8Q96G25 268 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 HIST1H2AHQ96KK5 128 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 IL17FQ96PD4 163 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 OR2A14Q96R47 310 aa12.48□□□□□ -0.41
TRAPPC4-212ENST00000533058 HIST1H2AJQ99878 128 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms