RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 FRMPD2BQ6IN97 320 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 MAMDC2Q7Z304 686 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TXLNBQ8N3L3 684 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 CCDC89Q8N998 374 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TTC29Q8NA56 475 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 DENND1AQ8TEH3 1009 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 MIPEPQ99797 713 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 WDR77Q9BQA1 342 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TREX1Q9NSU2 369 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 PAK5Q9P286 719 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 GNPTGQ9UJJ9 305 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TTC7AQ9ULT0 858 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 CNTRLQ7Z7A1 2325 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 FITM1A5D6W6 292 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 PIM1P11309 404 aaPredicted RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 NMBRP28336 390 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 YBX1P67809 324 aaKnown RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 SIX1Q15475 284 aaPredicted RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 PCID2Q5JVF3 399 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 CTSL3PQ5NE16 218 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 CNSTQ6PJW8 725 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 PARP9Q8IXQ6 854 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 PPP4R1Q8TF05 950 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 SKA2Q8WVK7 121 aaPredicted RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 RAD51AP1Q96B01 352 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 NACC2Q96BF6 587 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 PANX3Q96QZ0 392 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 RAB11FIP5Q9BXF6 653 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 MRM3Q9HC36 420 aaKnown RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 ENAMQ9NRM1 1142 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 STOX2Q9P2F5 926 aaPredicted RBP16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 SLC5A6Q9Y289 635 aa16.34■□□□□ 0.21
RPUSD4-207ENST00000532800 LOC105369274A0A096LPK9 316 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 LOC102723532A0A0G2JNH3 316 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 A0A1W2PPV9 198 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 VSTM2BA6NLU5 285 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 ARNTP27540 789 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 Q0VFX4 171 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 ELOAQ14241 798 aaKnown RBP16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 FASTKQ14296 549 aaKnown RBP16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 RBBP7Q16576 425 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 TUBB8Q3ZCM7 444 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 WASHC2DQ5SRD0 308 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 YOD1Q5VVQ6 348 aaPredicted RBP16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 TTC23LQ6PF05 361 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 IGFL2Q6UWQ7 119 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 PRSS58Q8IYP2 241 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 OR4N4Q8N0Y3 316 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 OR2L3Q8NG85 312 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 OR11G2Q8NGC1 345 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 GSDMBQ8TAX9 411 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 ZUFSPQ96AP4 578 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 FAM136AQ96C01 138 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 C5orf34Q96MH7 638 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 NXT1Q9UKK6 140 aaKnown RBP16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 POLEQ07864 2286 aa16.33■□□□□ 0.2
RPUSD4-207ENST00000532800 HYKKA2RU49 373 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 MYO9AB2RTY4 2548 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 TARM1B6A8C7 271 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 E2F3O00716 465 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 NDUFS3O75489 264 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 FKBP9O95302 570 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 RPS3P23396 243 aaKnown RBP eCLIP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 DCTP40126 519 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 BASP1P80723 227 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 AGAP7PQ5VUJ5 663 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 CES3Q6UWW8 571 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 RNF10Q8N5U6 811 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 OTUD6BQ8N6M0 293 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 SPC24Q8NBT2 197 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 OR2A1Q8NGT9 310 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 HMGCLL1Q8TB92 370 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 THOC3Q96J01 351 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 CNDP1Q96KN2 507 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 AGAP4Q96P64 663 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 CRB3Q9BUF7 120 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 LHPPQ9H008 270 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 EIF2B3Q9NR50 452 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 SEMA3GQ9NS98 782 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 ZC3H7BQ9UGR2 993 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 KLK4Q9Y5K2 254 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 FAM169AQ9Y6X4 670 aa16.32■□□□□ 0.2
RPUSD4-207ENST00000532800 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 GOLGA8TH3BQL2 631 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 SRPX2O60687 465 aaPredicted RBP16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 NIPSNAP2O75323 286 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 EIF2S1P05198 315 aaKnown RBP16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 MGAT1P26572 445 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 KLC1Q07866 573 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 FAM214AQ32MH5 1076 aa16.31■□□□□ 0.2
RPUSD4-207ENST00000532800 IRAK1BP1Q5VVH5 260 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms