RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 FBF1Q8TES7 1133 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 ZNF480Q8WV37 535 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 DLG3Q92796 817 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 PDLIM5Q96HC4 596 aaKnown RBP14.48□□□□□ -0.09
CPSF1-208ENST00000532560 GPR22Q99680 433 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 RBBP8Q99708 897 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 ANKZF1Q9H8Y5 726 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 PARVBQ9HBI1 364 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 POPDC3Q9HBV1 291 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 CPNE5Q9HCH3 593 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 FAM60AQ9NP50 221 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-208ENST00000532560 ADAMTS6Q9UKP5 1117 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 LHX6Q9UPM6 363 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 PDE10AQ9Y233 779 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 PCDHB3Q9Y5E6 796 aa14.48□□□□□ -0.09
CPSF1-208ENST00000532560 TEX51A0A1B0GUA7 166 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 E7ENX8 843 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 MAP2K7O14733 419 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 SCRG1O75711 98 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 SYF2O95926 243 aaKnown RBP14.47□□□□□ -0.09
CPSF1-208ENST00000532560 IMPA1P29218 277 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 PGGT1BP53609 377 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 TAS2R39P59534 338 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 POU4F1Q01851 419 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 TAP2Q03519 686 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 VAC14Q08AM6 782 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 SRSF6Q13247 344 aaKnown RBP14.47□□□□□ -0.09
CPSF1-208ENST00000532560 DEFB110Q30KQ9 67 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 KIAA1614Q5VZ46 1190 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 CCDC81Q6ZN84 652 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 DNAJC22Q8N4W6 341 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 GALNT6Q8NCL4 622 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 MCOLN3Q8TDD5 553 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 IFT81Q8WYA0 676 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 CCDC138Q96M89 665 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 FUT8Q9BYC5 575 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 NINJ2Q9NZG7 142 aa14.47□□□□□ -0.09
CPSF1-208ENST00000532560 LAMA5O15230 3695 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 TARM1B6A8C7 271 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 H3BMH7 237 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 EFSO43281 561 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 CCNDBP1O95273 360 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 WISP3O95389 354 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 ENO2P09104 434 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 LIFP15018 202 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 SAT1P21673 171 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 CMPK1P30085 196 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 PHBP35232 272 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 RPA3P35244 121 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 GRIA3P42263 894 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 ITGA1P56199 1179 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 ZNF460Q14592 562 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 EFTUD2Q15029 972 aaKnown RBP eCLIP14.46□□□□□ -0.092e-6■■■■□ 23.1
CPSF1-208ENST00000532560 PHKG1Q16816 387 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 GRTP1Q5TC63 336 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 FCRL6Q6DN72 434 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 SUSD1Q6UWL2 747 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 TMEM207Q6UWW9 146 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 CEP97Q8IW35 865 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 LRRC56Q8IYG6 542 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 SYTL1Q8IYJ3 562 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 NKAPQ8N5F7 415 aaKnown RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 PPM1NQ8N819 430 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 N4BP2L2Q92802 583 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 ZUFSPQ96AP4 578 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 KIAA1143Q96AT1 154 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 TSPAN17Q96FV3 270 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 LRFN5Q96NI6 719 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 MIPEPQ99797 713 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 EFHD1Q9BUP0 239 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 CDC42EP4Q9H3Q1 356 aaKnown RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 WDR70Q9NW82 654 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 STOX2Q9P2F5 926 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 ANKMY1Q9P2S6 941 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 SERTAD3Q9UJW9 196 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 NOVA2Q9UNW9 492 aaKnown RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 PLCL2Q9UPR0 1127 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 KLHL20Q9Y2M5 609 aa14.46□□□□□ -0.09
CPSF1-208ENST00000532560 MTO1Q9Y2Z2 717 aaKnown RBP14.46□□□□□ -0.09
CPSF1-208ENST00000532560 LOC101059948A0A1B0GTJ6 334 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 E7EQ34 232 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 HCRTR1O43613 425 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 NTRK1P04629 796 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 SPRP35270 261 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-208ENST00000532560 SLC12A2P55011 1212 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 AP1S2P56377 157 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 ZKSCAN8Q15776 578 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-208ENST00000532560 BEND6Q5SZJ8 279 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-208ENST00000532560 FIGLAQ6QHK4 219 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 SBSNQ6UWP8 590 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 GPR155Q7Z3F1 870 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 IFT20Q8IY31 132 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 GPR135Q8IZ08 494 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 PPFIBP2Q8ND30 876 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 RNF31Q96EP0 1072 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 ACAT2Q9BWD1 397 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 ACSS3Q9H6R3 686 aa14.45□□□□□ -0.1
CPSF1-208ENST00000532560 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms